RNA–Protein interactions for RNA: ENST00000403946.7

OTOF-205, Transcript of otoferlin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene OTOF, Length 6,937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-205ENST00000403946 TBC1D3Q8IZP1 549 aaPredicted RBP11.2□□□□□ -0.62
OTOF-205ENST00000403946 TRMT13Q9NUP7 481 aaKnown RBP11.2□□□□□ -0.62
OTOF-205ENST00000403946 KLHL3Q9UH77 587 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 XPO7Q9UIA9 1087 aaKnown RBP11.2□□□□□ -0.62
OTOF-205ENST00000403946 PNMA8BQ9ULN7 279 aaPredicted RBP11.2□□□□□ -0.62
OTOF-205ENST00000403946 PIPSLA2A3N6 862 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 THRAP10827 490 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 NR1D2Q14995 579 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 C6orf10Q5SRN2 563 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 C11orf88Q6PI97 169 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 USP38Q8NB14 1042 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 SPASTQ9UBP0 616 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 REREQ9P2R6 1566 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 CENPXA8MT69 81 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 MAP3K6O95382 1288 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 HPGDP15428 266 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 OR1D2P34982 312 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 XRCC4Q13426 336 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 CUL2Q13617 745 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 UBE2Q1Q7Z7E8 422 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 DENND6AQ8IWF6 608 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 SYTL1Q8IYJ3 562 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 CYP2W1Q8TAV3 490 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 ARHGAP9Q9BRR9 750 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 C11orf84Q9BUA3 381 aaPredicted RBP11.2□□□□□ -0.62
OTOF-205ENST00000403946 ZDHHC9Q9Y397 364 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 PXDNQ92626 1479 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 LACTBL1A8MY62 500 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 ALOX15P16050 662 aaPredicted RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 CDH3P22223 829 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 SWT1Q5T5J6 900 aaKnown RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 LRRC6Q86X45 466 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 LPCAT1Q8NF37 534 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 APBB2Q92870 758 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 GPN3Q9UHW5 284 aaPredicted RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 UMODL1Q5DID0 1318 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 APOA4P06727 396 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 MYL6P60660 151 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 REXO1L1PQ8IX06 675 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 ERP44Q9BS26 406 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 TRIM9Q9C026 710 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 NT5MQ9NPB1 228 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 SALL1Q9NSC2 1324 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 C1QTNF8P60827 252 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 MLLT1Q03111 559 aaPredicted RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 CCL14Q16627 93 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 KHDRBS2Q5VWX1 349 aaKnown RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 ZNF184Q99676 751 aaPredicted RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 GRID1Q9ULK0 1009 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 TK2O00142 265 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 SNRPAP09012 282 aaKnown RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 TALDO1P37837 337 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 CENPCQ03188 943 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 MTDHQ86UE4 582 aaKnown RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 TC2NQ8N9U0 490 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 SLC35G2Q8TBE7 412 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 B3GALT6Q96L58 329 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 SENP8Q96LD8 212 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 GRIP2Q9C0E4 1043 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 UVRAGQ9P2Y5 699 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 ITGA11Q9UKX5 1188 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 L1RE1Q9UN81 338 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 HBS1LQ9Y450 684 aaKnown RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 ZBTB39O15060 712 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 TPST1O60507 370 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 GEMIN4P57678 1058 aaKnown RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 TRAF3Q13114 568 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 STX5Q13190 355 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 SEMA3FQ13275 785 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 RAD9BQ6WBX8 426 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 ZBTB49Q6ZSB9 765 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 RBBP8Q99708 897 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 MKNK1Q9BUB5 465 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 NLNQ9BYT8 704 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 DCLK3Q9C098 648 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 PCDHGA3Q9Y5H0 932 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 TRPC5OSA6NMA1 111 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 UBXN8O00124 270 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 VDRP11473 427 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 PSMB9P28065 219 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 SLC18A3Q16572 532 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 TRIM74Q86UV6 250 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 TRIM73Q86UV7 250 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 ARID3BQ8IVW6 561 aaPredicted RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 ADAM32Q8TC27 787 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 FAR2Q96K12 515 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 FAM118BQ9BPY3 351 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 MLPHQ9BV36 600 aaPredicted RBP11.19□□□□□ -0.62
OTOF-205ENST00000403946 TASP1Q9H6P5 420 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 RRN3Q9NYV6 651 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 SRRDQ9UH36 339 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 ZNF180Q9UJW8 692 aa11.19□□□□□ -0.62
OTOF-205ENST00000403946 LIN7AO14910 233 aaPredicted RBP11.18□□□□□ -0.62
OTOF-205ENST00000403946 SPAG6O75602 509 aa11.18□□□□□ -0.62
OTOF-205ENST00000403946 YBX3P16989 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
OTOF-205ENST00000403946 CDH8P55286 799 aa11.18□□□□□ -0.62
OTOF-205ENST00000403946 NR1I3Q14994 352 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms