RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 KCTD10Q9H3F6 313 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 PRDM12Q9H4Q4 367 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 STXBP5LQ9Y2K9 1186 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 NUP98P52948 1817 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.12□□□□□ -0.31
LIN54-201ENST00000340417 MATKP42679 507 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 TGM3Q08188 693 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 HAUS8Q9BT25 410 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 SHOC2Q9UQ13 582 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 KCNK1O00180 336 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 ZNF185O15231 689 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 BMPR1AP36894 532 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 HSPA9P38646 679 aaKnown RBP13.12□□□□□ -0.31
LIN54-201ENST00000340417 HTR3CQ8WXA8 447 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 EMID1Q96A84 441 aaPredicted RBP13.12□□□□□ -0.31
LIN54-201ENST00000340417 FUBP3Q96I24 572 aaKnown RBP eCLIP13.12□□□□□ -0.314e-12■■■■■ 27.5
LIN54-201ENST00000340417 FCRL2Q96LA5 508 aaPredicted RBP13.12□□□□□ -0.31
LIN54-201ENST00000340417 DNAJC7Q99615 494 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 OSGEPQ9NPF4 335 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 MYBPHLA2RUH7 354 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 C1RP00736 705 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 KITP10721 976 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 COILP38432 576 aaPredicted RBP13.12□□□□□ -0.31
LIN54-201ENST00000340417 POU4F1Q01851 419 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 RAD9BQ6WBX8 426 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 HMGB4Q8WW32 186 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 LPIN3Q9BQK8 851 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 PAGE1O75459 146 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 RASSF9O75901 435 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 APOA4P06727 396 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 GLI1P08151 1106 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 GJA1P17302 382 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 TIE1P35590 1138 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 CDKAL1Q5VV42 579 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 RNF112Q9ULX5 631 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 NOL3O60936 208 aaKnown RBP13.11□□□□□ -0.31
LIN54-201ENST00000340417 SUN1O94901 812 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 BRAFP15056 766 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 ZNF143P52747 638 aaPredicted RBP13.11□□□□□ -0.31
LIN54-201ENST00000340417 GRM3Q14832 879 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 ANKS1BQ7Z6G8 1248 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 NECTIN4Q96NY8 510 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 CACNG4Q9UBN1 327 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 ELFN1P0C7U0 828 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 DDX39BQ13838 428 aaKnown RBP13.11□□□□□ -0.31
LIN54-201ENST00000340417 TTC39BQ5VTQ0 682 aaPredicted RBP13.11□□□□□ -0.31
LIN54-201ENST00000340417 C3orf62Q6ZUJ4 267 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 SPATA24Q86W54 205 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 SPATA4Q8NEY3 305 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 ATG4AQ8WYN0 398 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 PLD4Q96BZ4 506 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 FAR2Q96K12 515 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 IARS2Q9NSE4 1012 aaKnown RBP13.11□□□□□ -0.31
LIN54-201ENST00000340417 SELENONQ9NZV5 590 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 TMCO4Q5TGY1 634 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 OTOAQ7RTW8 1153 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 SH3RF1Q7Z6J0 888 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 AGR3Q8TD06 166 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 PRCCQ92733 491 aaPredicted RBP13.11□□□□□ -0.31
LIN54-201ENST00000340417 TBL1YQ9BQ87 522 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 DPEP3Q9H4B8 488 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 CNOT10Q9H9A5 744 aaKnown RBP13.11□□□□□ -0.31
LIN54-201ENST00000340417 HBS1LQ9Y450 684 aaKnown RBP13.11□□□□□ -0.31
LIN54-201ENST00000340417 DNAAF5Q86Y56 855 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 IRGQQ8WZA9 623 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 NMRK1Q9NWW6 199 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 GMEB2Q9UKD1 530 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 ERVW-1Q9UQF0 538 aa13.11□□□□□ -0.31
LIN54-201ENST00000340417 ITGB4P16144 1822 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 CILPO75339 1184 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 CST3P01034 146 aaPredicted RBP13.1□□□□□ -0.31
LIN54-201ENST00000340417 PRNPP04156 253 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 GJA8P48165 433 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 BPIFB1Q8TDL5 484 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 GDPD5Q8WTR4 605 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 CAPS2Q9BXY5 557 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 CARD9Q9H257 536 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 IKZF4Q9H2S9 585 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 NRDE2Q9H7Z3 1164 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 MED4Q9NPJ6 270 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 AVENQ9NQS1 362 aaPredicted RBP13.1□□□□□ -0.31
LIN54-201ENST00000340417 MPP6Q9NZW5 540 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 STARD13Q9Y3M8 1113 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 HACD1B0YJ81 288 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 KLRC4O43908 158 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 ITGA8P53708 1063 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 CDH17Q12864 832 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 GRM2Q14416 872 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 FAM83EQ2M2I3 478 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.1□□□□□ -0.31
LIN54-201ENST00000340417 CCNJLQ8IV13 435 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 SYTL1Q8IYJ3 562 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 ACDQ96AP0 544 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 C9orf72Q96LT7 481 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 TMEM121Q9BTD3 319 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 ST6GALNAC4Q9H4F1 302 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 CALCOCO1Q9P1Z2 691 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 UBR2Q8IWV8 1755 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 GALTP07902 379 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms