RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CIR1Q86X95 450 aaPredicted RBP25.25■■□□□ 1.63
HOXC9-201ENST00000303450 MFN1Q8IWA4 741 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 TEKT4Q8WW24 435 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 EPAS1Q99814 870 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 GOLPH3Q9H4A6 298 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 LZTFL1Q9NQ48 299 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.25■■□□□ 1.63
HOXC9-201ENST00000303450 PPARGC1AQ9UBK2 798 aaKnown RBP25.25■■□□□ 1.63
HOXC9-201ENST00000303450 A0A1B0GVM2 712 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 TCAF2A6NFQ2 919 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 DRGXA6NNA5 263 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 STK25O00506 426 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 LRIG2O94898 1065 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 MOCS3O95396 460 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 GALK1P51570 392 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 PON2Q15165 354 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 PREPLQ4J6C6 727 aaPredicted RBP25.24■■□□□ 1.63
HOXC9-201ENST00000303450 PPP6R3Q5H9R7 873 aaPredicted RBP25.24■■□□□ 1.63
HOXC9-201ENST00000303450 CARNMT1Q8N4J0 409 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 KIAA1524Q8TCG1 905 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 TBC1D31Q96DN5 1066 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 PNKPQ96T60 521 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 SLC2A11Q9BYW1 496 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 ZYG11BQ9C0D3 744 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 MRPS17Q9Y2R5 130 aaKnown RBP25.24■■□□□ 1.63
HOXC9-201ENST00000303450 MIA3Q5JRA6 1907 aa25.24■■□□□ 1.63
HOXC9-201ENST00000303450 IGLV3-10A0A075B6K4 115 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 H0Y626 953 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 LUC7L3O95232 432 aaKnown RBP25.23■■□□□ 1.63
HOXC9-201ENST00000303450 DGKGP49619 791 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 IRAK1P51617 712 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 CDH18Q13634 790 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 ZFYVE27Q5T4F4 411 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 MANEALQ5VSG8 457 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 GRAMD4Q6IC98 578 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 CCAR2Q8N163 923 aaKnown RBP25.23■■□□□ 1.63
HOXC9-201ENST00000303450 ZNF557Q8N988 423 aaPredicted RBP25.23■■□□□ 1.63
HOXC9-201ENST00000303450 MFSD1Q9H3U5 465 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 MPP6Q9NZW5 540 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 FBXO10Q9UK96 956 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 CLEC4EQ9ULY5 219 aa25.23■■□□□ 1.63
HOXC9-201ENST00000303450 KANSL1LA0AUZ9 987 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 SHISA7A6NL88 538 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 ZSCAN12O43309 604 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 CLDN11O75508 207 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 CNTN5O94779 1100 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 TNNT1P13805 278 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 CDH4P55283 916 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 KDSRQ06136 332 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 SEMA3BQ13214 749 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 ALFQ53S48 1182 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 RNF43Q68DV7 783 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 POLNQ7Z5Q5 900 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 RHOT1Q8IXI2 618 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 KCTD15Q96SI1 283 aaPredicted RBP25.22■■□□□ 1.63
HOXC9-201ENST00000303450 TBC1D17Q9HA65 648 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 ARHGEF4Q9NR80 690 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 NDRG2Q9UN36 371 aaKnown RBP25.22■■□□□ 1.63
HOXC9-201ENST00000303450 TECTAO75443 2155 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 GRID2IPA4D2P6 1211 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 TRIM24O15164 1050 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 EPHB2P29323 1055 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 TPI1P60174 286 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 GRSF1Q12849 480 aaKnown RBP eCLIP25.22■■□□□ 1.63
HOXC9-201ENST00000303450 KRT81Q14533 505 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 DPYSL2Q16555 572 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 ATP13A4Q4VNC1 1196 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 TMEM196Q5HYL7 178 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 CHST9Q7L1S5 443 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 SUGP1Q8IWZ8 645 aaKnown RBP25.22■■□□□ 1.63
HOXC9-201ENST00000303450 SYCE1Q8N0S2 351 aa25.22■■□□□ 1.63
HOXC9-201ENST00000303450 FBRSL1Q9HCM7 1045 aaKnown RBP25.22■■□□□ 1.63
HOXC9-201ENST00000303450 DOCK4Q8N1I0 1966 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.21■■□□□ 1.63
HOXC9-201ENST00000303450 TMEM221A6NGB7 291 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 M0R296 226 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 EEF2KO00418 725 aaKnown RBP25.21■■□□□ 1.63
HOXC9-201ENST00000303450 PALMO75781 387 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 APODP05090 189 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 CISD3P0C7P0 127 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 HTR7P34969 479 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 ZNF135P52742 658 aaPredicted RBP25.21■■□□□ 1.63
HOXC9-201ENST00000303450 ZNF177Q13360 481 aaPredicted RBP25.21■■□□□ 1.63
HOXC9-201ENST00000303450 UBXN2BQ14CS0 331 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 ARTNQ5T4W7 220 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 LRRC38Q5VT99 294 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 LRRC57Q8N9N7 239 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 FIBINQ8TAL6 211 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 NELL2Q99435 816 aa25.21■■□□□ 1.63
HOXC9-201ENST00000303450 KAT7O95251 611 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 DRD1P21728 446 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 ARL4AP40617 200 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 GRIA2P42262 883 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 CDH6P55285 790 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 NUDT18Q6ZVK8 323 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 TFAP2DQ7Z6R9 452 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 KCTD6Q8NC69 237 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 FLCNQ8NFG4 579 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 WFDC5Q8TCV5 224 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 LTB4R2Q9NPC1 389 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms