RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SPAG6O75602 509 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 GSRP00390 522 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 ELNP15502 786 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 KCNA4P22459 653 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 CCND3P30281 292 aaPredicted RBP12.1□□□□□ -0.47
RHO-201ENST00000296271 ERFP50548 548 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 TPI1P60174 286 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
RHO-201ENST00000296271 TMPRSS15P98073 1019 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 SMYD5Q6GMV2 418 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 RFWD3Q6PCD5 774 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 OTOP3Q7RTS5 596 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 SAPCD2Q86UD0 394 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 TAC4Q86UU9 113 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 PNPLA1Q8N8W4 532 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 FBXO27Q8NI29 283 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 COLEC11Q9BWP8 271 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 TBC1D10AQ9BXI6 508 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 NDFIP2Q9NV92 336 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 NKX1-2Q9UD57 310 aaPredicted RBP12.1□□□□□ -0.47
RHO-201ENST00000296271 EMCNQ9ULC0 261 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 ZNF487B1APH4 448 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 TRDMT1O14717 391 aaKnown RBP12.09□□□□□ -0.47
RHO-201ENST00000296271 ATP9BO43861 1147 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 DUSP11O75319 330 aaKnown RBP12.09□□□□□ -0.47
RHO-201ENST00000296271 LRIG2O94898 1065 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 ASGR1P07306 291 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 GNAT1P11488 350 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 FLT3LGP49771 235 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 ARFIP2P53365 341 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 SEMA3BQ13214 749 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 PPP2R5DQ14738 602 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 DLG2Q15700 870 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 FYB2Q5VWT5 728 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 TAF2Q6P1X5 1199 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 ARID3BQ8IVW6 561 aaPredicted RBP12.09□□□□□ -0.47
RHO-201ENST00000296271 KCNV2Q8TDN2 545 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 MFSD3Q96ES6 412 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 MTG1Q9BT17 334 aaPredicted RBP12.09□□□□□ -0.47
RHO-201ENST00000296271 MLPHQ9BV36 600 aaPredicted RBP12.09□□□□□ -0.47
RHO-201ENST00000296271 CAB39LQ9H9S4 337 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 XPNPEP3Q9NQH7 507 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 OR12D3Q9UGF7 316 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 SFMBT1Q9UHJ3 866 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 FBXW11Q9UKB1 542 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 RPS6KL1Q9Y6S9 549 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 SDR42E2A6NKP2 422 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 CYBAP13498 195 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 ARRB2P32121 409 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 NIPAL4Q0D2K0 466 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 CCDC15Q0P6D6 951 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 PDE1CQ14123 709 aaPredicted RBP12.09□□□□□ -0.47
RHO-201ENST00000296271 PAFAH1B3Q15102 231 aaKnown RBP12.09□□□□□ -0.47
RHO-201ENST00000296271 LRRC8BQ6P9F7 803 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 PACS1Q6VY07 963 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 KDELC2Q7Z4H8 507 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 SERINC5Q86VE9 423 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 LONP2Q86WA8 852 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 TTC8Q8TAM2 541 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 ADAM2Q99965 735 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 EBF4Q9BQW3 602 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 PLCD4Q9BRC7 762 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 TACO1Q9BSH4 297 aaKnown RBP12.09□□□□□ -0.47
RHO-201ENST00000296271 TRIM55Q9BYV6 548 aa12.09□□□□□ -0.47
RHO-201ENST00000296271 XAB2Q9HCS7 855 aaKnown RBP12.09□□□□□ -0.47
RHO-201ENST00000296271 PRKCGP05129 697 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 RPSAP08865 295 aaKnown RBP12.08□□□□□ -0.48
RHO-201ENST00000296271 TROVE2P10155 538 aaKnown RBP eCLIP12.08□□□□□ -0.48
RHO-201ENST00000296271 NFKB1P19838 968 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 ALDH3A1P30838 453 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 GLUD2P49448 558 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 MGAT3Q09327 533 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 PDK1Q15118 436 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 KCNA10Q16322 511 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 RAB41Q5JT25 222 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 CHSY1Q86X52 802 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 SPATA22Q8NHS9 363 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 NMUR2Q9GZQ4 415 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 WDCPQ9H6R7 721 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 ZNF180Q9UJW8 692 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 DCTN3O75935 186 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 KRT38O76015 456 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 JCHAINP01591 159 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 CCNFP41002 786 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 GJA9P57773 515 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 PRKCZQ05513 592 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 RWDD4Q6NW29 188 aaKnown RBP12.08□□□□□ -0.48
RHO-201ENST00000296271 RGMBQ6NW40 437 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 NUDCD3Q8IVD9 361 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 PLD6Q8N2A8 252 aaKnown RBP12.08□□□□□ -0.48
RHO-201ENST00000296271 FAM13CQ8NE31 585 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 SHKBP1Q8TBC3 707 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 GPR152Q8TDT2 470 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 RNF34Q969K3 372 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 E2F7Q96AV8 911 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 LRRC39Q96DD0 335 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 NCAPGQ9BPX3 1015 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 CHRAC1Q9NRG0 131 aa12.08□□□□□ -0.48
RHO-201ENST00000296271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.07□□□□□ -0.48
RHO-201ENST00000296271 MANSC4A6NHS7 340 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms