RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 SRCAPQ6ZRS2 3230 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 BTNL10A8MVZ5 291 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 MPOP05164 745 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 HALP42357 657 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 BRCC3P46736 316 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 NME5P56597 212 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 GRIK3Q13003 919 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 TUSC3Q13454 348 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 NEPROQ6NW34 567 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ERAP2Q6P179 960 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 TPGS1Q6ZTW0 290 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 GLT6D1Q7Z4J2 308 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 HOMEZQ8IX15 550 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 FAM9CQ8IZT9 166 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 CLEC4DQ8WXI8 215 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 NR1H4Q96RI1 486 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 CAMKK2Q96RR4 588 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 TBL1YQ9BQ87 522 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 DHX33Q9H6R0 707 aaKnown RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 NRDE2Q9H7Z3 1164 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 FMN2Q9NZ56 1722 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 COL1A2P08123 1366 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 ZNF862O60290 1169 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 ETS1P14921 441 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 RASA2Q15283 850 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 PPP1R26Q5T8A7 1209 aaPredicted RBP11.51□□□□□ -0.57
USP6NL-201ENST00000277575 ARMC12Q5T9G4 340 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 SPRYD7Q5W111 196 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 PPP4R4Q6NUP7 873 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 PSTKQ8IV42 348 aaKnown RBP11.51□□□□□ -0.57
USP6NL-201ENST00000277575 EIF1ADQ8N9N8 165 aaKnown RBP11.51□□□□□ -0.57
USP6NL-201ENST00000277575 PGM2Q96G03 612 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 SLC40A1Q9NP59 571 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 RNF225M0QZC1 329 aaPredicted RBP11.51□□□□□ -0.57
USP6NL-201ENST00000277575 CLDN5O00501 218 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 CSH1P0DML2 217 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 CSH2P0DML3 217 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 ZBTB48P10074 688 aaPredicted RBP11.51□□□□□ -0.57
USP6NL-201ENST00000277575 PSMB4P28070 264 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 PSEN1P49768 467 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 DAB2IPQ5VWQ8 1189 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 CCDC149Q6ZUS6 474 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 POLNQ7Z5Q5 900 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 OLFM3Q96PB7 478 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 DEFB118Q96PH6 123 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 CPNE1Q99829 537 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 TMEM120AQ9BXJ8 343 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 NIFKQ9BYG3 293 aaKnown RBP11.51□□□□□ -0.57
USP6NL-201ENST00000277575 CNGB3Q9NQW8 809 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 KCND1Q9NSA2 647 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 LOC102724159A0A0B4J2E5 919 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 SMIM28A0A1B0GU29 152 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 F8W810 466 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 TRDMT1O14717 391 aaKnown RBP11.51□□□□□ -0.57
USP6NL-201ENST00000277575 LIASO43766 372 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 SERPINE1P05121 402 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 ERCC2P18074 760 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 CRABP2P29373 138 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 RPL22P35268 128 aaKnown RBP11.51□□□□□ -0.57
USP6NL-201ENST00000277575 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 PRKAA1Q13131 559 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 PWP2Q15269 919 aaKnown RBP11.51□□□□□ -0.57
USP6NL-201ENST00000277575 NR6A1Q15406 480 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 FUT11Q495W5 492 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 ZNF662Q6ZS27 426 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 USP6NLQ92738 828 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 TMEM159Q96B96 161 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 ZBTB10Q96DT7 871 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 PCYOX1Q9UHG3 505 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 DNMT3LQ9UJW3 386 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 ITM2BQ9Y287 266 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 SLC27A5Q9Y2P5 690 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 DYRK1BQ9Y463 629 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 NRXN3Q9Y4C0 1643 aa11.51□□□□□ -0.57
USP6NL-201ENST00000277575 ARIH2O95376 493 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 MSH3P20585 1137 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 ICAM3P32942 547 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 MATKP42679 507 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 SERPINH1P50454 418 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 KLC1Q07866 573 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 MMRN1Q13201 1228 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 USP41Q3LFD5 358 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TMEM199Q8N511 208 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TOP6BLQ8N6T0 577 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TDRD5Q8NAT2 981 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TSEN2Q8NCE0 465 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 DNAJC9Q8WXX5 260 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 JADE3Q92613 823 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 APOPT1Q96IL0 206 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 CASZ1Q86V15 1759 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 PLIN4Q96Q06 1357 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TMEM88BA6NKF7 163 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 PDZK1P1A8MUH7 402 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TREHO43280 583 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 ATP5BP06576 529 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 PBX1P40424 430 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 BOP1Q14137 746 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 ANKS6Q68DC2 871 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 FAM35AQ86V20 835 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 FBXO39Q8N4B4 442 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms