RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 SAMD4BQ5PRF9 694 aaKnown RBP16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 NT5DC4Q86YG4 428 aa16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 CLVS1Q8IUQ0 354 aaPredicted RBP16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 SLC25A23Q9BV35 468 aa16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 WDR41Q9HAD4 459 aa16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 PALMDQ9NP74 551 aa16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 PRDM5Q9NQX1 630 aaPredicted RBP16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 MAN1C1Q9NR34 630 aa16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 PDGFCQ9NRA1 345 aa16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 PNMA8BQ9ULN7 279 aaPredicted RBP16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 NID2Q14112 1375 aa16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 ZMYM2Q9UBW7 1377 aa16.3■□□□□ 0.2
LRRFIP1-201ENST00000244815 CASTOR2A6NHX0 329 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 DPYSL4O14531 572 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 UPP2O95045 317 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 RAD23AP54725 363 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 SLC1A5Q15758 541 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 PKN3Q6P5Z2 889 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 ARCQ7LC44 396 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 ZFRQ96KR1 1074 aaKnown RBP16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 VAT1Q99536 393 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 PAIP1Q9H074 479 aaKnown RBP16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 PRDM12Q9H4Q4 367 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 SLC12A8A0AV02 714 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 NRF1Q16656 503 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 FAM183BPQ6ZVS7 135 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 JOSD2Q8TAC2 188 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 SLC16A10Q8TF71 515 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 TLCD1Q96CP7 247 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 TMEM109Q9BVC6 243 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 MID1IP1Q9NPA3 183 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 MYRFQ9Y2G1 1151 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 TSC22D4Q9Y3Q8 395 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 RAD54BQ9Y620 910 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 MRPL42Q9Y6G3 142 aaKnown RBP16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 LYPLA2O95372 231 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 CRTAMO95727 393 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 SERPIND1P05546 499 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 JAM2P57087 298 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 UBE3AQ05086 875 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 TRAF2Q12933 501 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 C16orf72Q14CZ0 275 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 ZC3H12AQ5D1E8 599 aaKnown RBP16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 TJAP1Q5JTD0 557 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 DEPDC1Q5TB30 811 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 NEPROQ6NW34 567 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 TMCO5AQ8N6Q1 288 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 MAML3Q96JK9 1138 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 PEX1O43933 1283 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 ANPEPP15144 967 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 ASTE1Q2TB18 679 aaPredicted RBP16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 ANKS6Q68DC2 871 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 ALYREFQ86V81 257 aaKnown RBP16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 PSTKQ8IV42 348 aaKnown RBP16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 HELQQ8TDG4 1101 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 PHACTR1Q9C0D0 580 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 GRIP2Q9C0E4 1043 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 CLPBQ9H078 707 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 CDT1Q9H211 546 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 SEMA6AQ9H2E6 1030 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 RGS18Q9NS28 235 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 PCDHB8Q9UN66 801 aa16.29■□□□□ 0.2
LRRFIP1-201ENST00000244815 A8MUI8 341 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 PGM3O95394 542 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 LDLRP01130 860 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 SERPINF2P08697 491 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 TUBP50607 506 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 SCNN1BP51168 640 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 TATDN1Q6P1N9 297 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 ADCK2Q7Z695 626 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 MIER2Q8N344 545 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 WNT8BQ93098 351 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 KCTD14Q9BQ13 255 aaPredicted RBP16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 ULBP1Q9BZM6 244 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 CDHR5Q9HBB8 845 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 GSTT1P30711 240 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 NOS2P35228 1153 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 UBAP2LQ14157 1087 aaKnown RBP16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 CYP51A1Q16850 503 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 CENPLQ8N0S6 344 aaPredicted RBP16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 EFCAB3Q8N7B9 438 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 ACMSDQ8TDX5 336 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 BDH2Q9BUT1 245 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 ARL8BQ9NVJ2 186 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 GPR182O15218 404 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 CREB1P16220 341 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 DDX5P17844 614 aaKnown RBP16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 RTP1P59025 263 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 CSTF3Q12996 717 aaKnown RBP16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.28■□□□□ 0.23e-6■■■■■ 97.5
LRRFIP1-201ENST00000244815 FBXO39Q8N4B4 442 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 BHLHE22Q8NFJ8 381 aaPredicted RBP16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 B4GALNT2Q8NHY0 566 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 DNAJB3Q8WWF6 145 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 DYRK4Q9NR20 520 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 PLA2G4CQ9UP65 541 aa16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 RIMS1Q86UR5 1692 aaKnown RBP16.28■□□□□ 0.2
LRRFIP1-201ENST00000244815 CNTNAP2Q9UHC6 1331 aa16.27■□□□□ 0.2
LRRFIP1-201ENST00000244815 PSMD12O00232 456 aaPredicted RBP16.27■□□□□ 0.2
LRRFIP1-201ENST00000244815 DNAJB2P25686 324 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms