RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 FGD3Q5JSP0 725 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF470Q6ECI4 717 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 IRGCQ6NXR0 463 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 MZT2BQ6NZ67 158 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 CARNMT1Q8N4J0 409 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 LACRTQ9GZZ8 138 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 TRIM39Q9HCM9 518 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 CCNT2O60583 730 aaKnown RBP9.81□□□□□ -0.84
CSMD1-217ENST00000602723 MT-CO1P00395 513 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 IFNGR2P38484 337 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 SPPL2AQ8TCT8 520 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 DSEQ9UL01 958 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 VAV1P15498 845 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 ALDH7A1P49419 539 aaKnown RBP9.81□□□□□ -0.84
CSMD1-217ENST00000602723 TRIM32Q13049 653 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 STARD3Q14849 445 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 GLRA4Q5JXX5 417 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 GTF3C2Q8WUA4 911 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-217ENST00000602723 CENPIQ92674 756 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-217ENST00000602723 SEMA4AQ9H3S1 761 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 CD44P16070 742 aaKnown RBP9.81□□□□□ -0.84
CSMD1-217ENST00000602723 MSH3P20585 1137 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 PRKAA2P54646 552 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 ITGADQ13349 1161 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 RGS21Q2M5E4 152 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 GRTP1Q5TC63 336 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 ZDHHC13Q8IUH4 622 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 FAM126BQ8IXS8 530 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 SENP2Q9HC62 589 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 CYP7B1O75881 506 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 JCHAINP01591 159 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 LRG1P02750 347 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 TGFBR2P37173 567 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 ELK3P41970 407 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 CD151P48509 253 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF284Q2VY69 593 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 FBXO39Q8N4B4 442 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 DCLK3Q9C098 648 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 UNKQ9C0B0 810 aaKnown RBP9.81□□□□□ -0.84
CSMD1-217ENST00000602723 EPB41L4BQ9H329 900 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 KLK14Q9P0G3 267 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 DCXO43602 365 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 LTFP02788 710 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 MAPK10P53779 464 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 CYP24A1Q07973 514 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF571Q7Z3V5 609 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-217ENST00000602723 SNX32Q86XE0 403 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 OR7A2PQ8NGA2 310 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF483Q8TF39 744 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF512BQ96KM6 892 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-217ENST00000602723 CGRRF1Q99675 332 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 CBWD1Q9BRT8 395 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 DPY30Q9C005 99 aa9.81□□□□□ -0.84
CSMD1-217ENST00000602723 RCVRNP35243 200 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 NEK3P51956 506 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 NR1D2Q14995 579 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 DMGDHQ9UI17 866 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 CNOT7Q9UIV1 285 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 LGALS3BPQ08380 585 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 EFEMP1Q12805 493 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 TTI2Q6NXR4 508 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 KYAT3Q6YP21 454 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 GATAD2AQ86YP4 633 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 DHRSXQ8N5I4 330 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 CAPSLQ8WWF8 208 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 POP1Q99575 1024 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 TINF2Q9BSI4 451 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 NUAK2Q9H093 628 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 OSGEPQ9NPF4 335 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 NYAP2Q9P242 653 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 BCLAF3A2AJT9 711 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 H7C4K7 107 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 PLCL1Q15111 1095 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 STRIP1Q5VSL9 837 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 PACS2Q86VP3 889 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 DAGLBQ8NCG7 672 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 JMJD4Q9H9V9 463 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 RNASEH1O60930 286 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 RGS20O76081 388 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 ECDO95905 644 aaPredicted RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 AKAP5P24588 427 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 TSPAN14Q8NG11 270 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 PIGUQ9H490 435 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 OSGEPL1Q9H4B0 414 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 ZFYVE1Q9HBF4 777 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 SAR1AQ9NR31 198 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 BRWD1Q9NSI6 2320 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 COQ6Q9Y2Z9 468 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 IQGAP1P46940 1657 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 ETS1P14921 441 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 RASA1P20936 1047 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 NPY2RP49146 381 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 EZH2Q15910 746 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 REPS1Q96D71 796 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 REEP1Q9H902 201 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 FSBPO95073 299 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 VDRP11473 427 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 SRP54P61011 504 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 TMEM132BQ14DG7 1078 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms