RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 GGA2Q9UJY4 613 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 HBS1LQ9Y450 684 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 HLA-DRAP01903 254 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PABPC1P11940 636 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 POLR2EP19388 210 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 NASPP49321 788 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ST8SIA6P61647 398 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 YWHAGP61981 247 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 RHDQ02161 417 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TLE3Q04726 772 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TRIP4Q15650 581 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 C8orf34Q49A92 452 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TAF1BQ53T94 588 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 MPP7Q5T2T1 576 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ADGRF1Q5T601 910 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 MBLAC2Q68D91 279 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 FAM173BQ6P4H8 233 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ADIPOR2Q86V24 386 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ZNF366Q8N895 744 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 OR2T34Q8NGX1 318 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 RFFLQ8WZ73 363 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TSC1Q92574 1164 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ELMO3Q96BJ8 720 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TWNKQ96RR1 684 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ARID3AQ99856 593 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 RSPH9Q9H1X1 276 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PABPC3Q9H361 631 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ERVMER34-1Q9H9K5 563 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 AASDHPPTQ9NRN7 309 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 DMAC2Q9NW81 257 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 FBXL12Q9NXK8 326 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 STOML2Q9UJZ1 356 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 FZD4Q9ULV1 537 aa12.73□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TEX15Q9BXT5 2789 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 FAM47DPA6NHR8 397 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PDXKO00764 312 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SPTLC2O15270 562 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 MAGEC1O60732 1142 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PPP6R2O75170 966 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CKMT2P17540 419 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SYT1P21579 422 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 EPHA8P29322 1005 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CCR5P51681 352 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 GALCP54803 685 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CXADRP78310 365 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 DLG4P78352 724 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CUL4AQ13619 759 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TBC1D25Q3MII6 688 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PPP1R26Q5T8A7 1209 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 BROXQ5VW32 411 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SPOPLQ6IQ16 392 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 KDM1BQ8NB78 822 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 LINC00301Q8NCQ3 95 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ZNF248Q8NDW4 579 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 RNF139Q8WU17 664 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 FAXDC2Q96IV6 333 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SLC6A18Q96N87 628 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 NIF3L1Q9GZT8 377 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ADAMTS1Q9UHI8 967 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CLCA2Q9UQC9 943 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 FRMD4BQ9Y2L6 1034 aa12.72□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TLR4O00206 839 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 MAPK13O15264 365 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 IRAK2O43187 625 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 BRINP1O60477 761 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ZBED1O96006 694 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ASLP04424 464 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CD58P19256 250 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 GLDCP23378 1020 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 RXRGP48443 463 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 E2F1Q01094 437 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ARID5BQ14865 1188 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 HNRNPA1L2Q32P51 320 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 RAB41Q5JT25 222 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PRAMEF14Q5SWL7 426 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PM20D1Q6GTS8 502 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 NCEH1Q6PIU2 408 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 FMNL3Q8IVF7 1028 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SPACA3Q8IXA5 215 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 LSMEM2Q8N112 164 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 HEXIM2Q96MH2 286 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 LGMNQ99538 433 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 OMDQ99983 421 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PLXNA2O75051 1894 aa12.71□□□□□ -0.37
CDK5RAP3-216ENST00000579853 A0A1W2PR77 199 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TARSL2A2RTX5 802 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 CBX4O00257 560 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 CUTAO60888 179 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 NUDT1P36639 197 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TKTL1P51854 596 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 CLDN6P56747 220 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 PCBP4P57723 403 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TMPRSS3P57727 454 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 NXPH1P58417 271 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 CCDC173Q0VFZ6 552 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 OVGP1Q12889 678 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 SHBQ15464 509 aa12.7□□□□□ -0.38
CDK5RAP3-216ENST00000579853 CST6Q15828 149 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms