RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SLC30A1Q9Y6M5 507 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 PSMD12O00232 456 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 KDELR1P24390 212 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 GSSP48637 474 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 CCT8P50990 548 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 CRADDP78560 199 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 WASHC5Q12768 1159 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 ACSBG2Q5FVE4 666 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 SPANXN2Q5MJ10 180 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 ANO7Q6IWH7 933 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 HHIPL2Q6UWX4 724 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 FAM71AQ8IYT1 594 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 C4orf32Q8N8J7 132 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 COMMD8Q9NX08 183 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 HIST1H2AGP0C0S8 130 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 CYP2C8P10632 490 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 PGAM1P18669 254 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 CCNA2P20248 432 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 HIST1H2ADP20671 130 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 HMGCS2P54868 508 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 TRAF3Q13114 568 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 DCAF4L1Q3SXM0 396 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 KIAA1841Q6NSI8 718 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 PLEKHM3Q6ZWE6 761 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 OTOP1Q7RTM1 612 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 SAPCD2Q86UD0 394 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 KCNMB4Q86W47 210 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 STX19Q8N4C7 294 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 FAM47BQ8NA70 645 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 OR7A2PQ8NGA2 310 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 HIST1H2AHQ96KK5 128 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 HIST1H2AJQ99878 128 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 H2AFJQ9BTM1 129 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 TRIM39Q9HCM9 518 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 TRNAU1APQ9NX07 287 aaKnown RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 ANKRD63C9JTQ0 380 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 TNPO2O14787 897 aaKnown RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 FANCGO15287 622 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 USP12O75317 370 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 POU1F1P28069 291 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 IL12RB1P42701 662 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 SPIDRQ14159 915 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 ARCQ7LC44 396 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 SLFN11Q7Z7L1 901 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 VPS33AQ96AX1 596 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 OSBPL11Q9BXB4 747 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 VTA1Q9NP79 307 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 NKX1-2Q9UD57 310 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 SFMBT1Q9UHJ3 866 aa12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 EIF3LQ9Y262 564 aaKnown RBP12.68□□□□□ -0.38
CSPG4P13-202ENST00000567704 TCRBV9S1A1TA0A576 114 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 PRPF4O43172 522 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 NFIAQ12857 509 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 POU6F1Q14863 301 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 NPNTQ6UXI9 565 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 ZDHHC13Q8IUH4 622 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 BBS7Q8IWZ6 715 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 POC5Q8NA72 575 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 ACER1Q8TDN7 264 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 UBASH3BQ8TF42 649 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 HTR3CQ8WXA8 447 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 LRRC39Q96DD0 335 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 CPNE1Q99829 537 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 PNPOQ9NVS9 261 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 CDV3Q9UKY7 258 aaKnown RBP12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 GNEQ9Y223 722 aaKnown RBP12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 ERI2A8K979 691 aaKnown RBP12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 KCNK1O00180 336 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 RAD51BO15315 384 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 EPHA3P29320 983 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 TAS2R40P59535 323 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 VPS72Q15906 364 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 IER5Q5VY09 327 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 PRMT9Q6P2P2 845 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 KCNT2Q6UVM3 1135 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 ABRAXAS1Q6UWZ7 409 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 MYO1HQ8N1T3 1032 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 BLOC1S5Q8TDH9 187 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 HPS1Q92902 700 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 TNFRSF25Q93038 417 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 GJD4Q96KN9 370 aaPredicted RBP12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 EBF3Q9H4W6 596 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 LIMD1Q9UGP4 676 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 FRMPD4Q14CM0 1322 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 RPTORQ8N122 1335 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 MAGEC1O60732 1142 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 PEX2P28328 305 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 EGFLAMQ63HQ2 1017 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 PTRHD1Q6GMV3 140 aaKnown RBP12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 SFRP1Q8N474 314 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 ETNK2Q9NVF9 386 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 TRIM38O00635 465 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 MAFGO15525 162 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 PEX11AO75192 247 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 HMGCRP04035 888 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 AMPD1P23109 780 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 PSMA8Q8TAA3 256 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 MCRS1Q96EZ8 462 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms