RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 DLDP09622 509 aaKnown RBP12.41□□□□□ -0.42
UBR1-206ENST00000566493 KRT5P13647 590 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 GCNT1Q02742 428 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 RING1Q06587 406 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 TRIP6Q15654 476 aaKnown RBP12.41□□□□□ -0.42
UBR1-206ENST00000566493 ZNF423Q2M1K9 1284 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 MPP7Q5T2T1 576 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 PIK3R6Q5UE93 754 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 MBLAC2Q68D91 279 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 TTI2Q6NXR4 508 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 RFWD3Q6PCD5 774 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 FOXR2Q6PJQ5 311 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 IL27RAQ6UWB1 636 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 ADIPOR2Q86V24 386 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 NAXDQ8IW45 347 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 MFN1Q8IWA4 741 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.41□□□□□ -0.42
UBR1-206ENST00000566493 KDF1Q8NAX2 398 aaPredicted RBP12.41□□□□□ -0.42
UBR1-206ENST00000566493 HJURPQ8NCD3 748 aaPredicted RBP12.41□□□□□ -0.42
UBR1-206ENST00000566493 SNX19Q92543 992 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 KAT5Q92993 513 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 TRIM62Q9BVG3 475 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 TMEM245Q9H330 911 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 ST7Q9NRC1 585 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 STIM2Q9P246 746 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 EIF2B4Q9UI10 523 aaKnown RBP12.41□□□□□ -0.42
UBR1-206ENST00000566493 ZMIZ1Q9ULJ6 1067 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 CTNND2Q9UQB3 1225 aa12.41□□□□□ -0.42
UBR1-206ENST00000566493 GOLGA6L7A0A1B0GV03 622 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 PPP1R3GB7ZBB8 358 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 CAPN9O14815 690 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 MED7O43513 233 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 GJB3O75712 270 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 FGFR1OPO95684 399 aaKnown RBP12.4□□□□□ -0.42
UBR1-206ENST00000566493 CER1O95813 267 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 AFPP02771 609 aaKnown RBP12.4□□□□□ -0.42
UBR1-206ENST00000566493 MATKP42679 507 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 ACADSBP45954 432 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 SGSHP51688 502 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 ST8SIA6P61647 398 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 FAM193AP78312 1265 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 ZBTB16Q05516 673 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 KCNH2Q12809 1159 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 TTC31Q49AM3 519 aaPredicted RBP12.4□□□□□ -0.42
UBR1-206ENST00000566493 KIAA0907Q7Z7F0 614 aaPredicted RBP12.4□□□□□ -0.42
UBR1-206ENST00000566493 ARHGEF19Q8IW93 802 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 SCUBE3Q8IX30 993 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 ZNF366Q8N895 744 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 LMO3Q8TAP4 145 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 SETD7Q8WTS6 366 aaKnown RBP12.4□□□□□ -0.42
UBR1-206ENST00000566493 CLEC4CQ8WTT0 213 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 CAMK1GQ96NX5 476 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 SERPINB11Q96P15 392 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 ZSWIM1Q9BR11 485 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 BTBD1Q9H0C5 482 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 GAREM1Q9H706 876 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 NCKAP1Q9Y2A7 1128 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 MSRB2Q9Y3D2 182 aa12.4□□□□□ -0.42
UBR1-206ENST00000566493 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.4□□□□□ -0.42
UBR1-206ENST00000566493 BIN1O00499 593 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 CALCAP01258 141 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 ASLP04424 464 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 SLC6A4P31645 630 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 CD70P32970 193 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 AFF3P51826 1226 aaKnown RBP12.39□□□□□ -0.43
UBR1-206ENST00000566493 STX17P56962 302 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 RPS14P62263 151 aaKnown RBP12.39□□□□□ -0.43
UBR1-206ENST00000566493 SFSWAPQ12872 951 aaKnown RBP12.39□□□□□ -0.43
UBR1-206ENST00000566493 PAK1Q13153 545 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 MORC3Q14149 939 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 TEAD4Q15561 434 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 PTPRNQ16849 979 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 FAM133BQ5BKY9 247 aaKnown RBP12.39□□□□□ -0.43
UBR1-206ENST00000566493 TRIM59Q8IWR1 403 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 CARNMT1Q8N4J0 409 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 CHCHD4Q8N4Q1 142 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 FIBINQ8TAL6 211 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 DQX1Q8TE96 717 aaKnown RBP12.39□□□□□ -0.43
UBR1-206ENST00000566493 GANCQ8TET4 914 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 GATA6Q92908 595 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 FAM149B1Q96BN6 582 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 SRRTQ9BXP5 876 aaKnown RBP12.39□□□□□ -0.43
UBR1-206ENST00000566493 INTS2Q9H0H0 1204 aaKnown RBP12.39□□□□□ -0.43
UBR1-206ENST00000566493 UBE2TQ9NPD8 197 aaPredicted RBP12.39□□□□□ -0.43
UBR1-206ENST00000566493 PRSS16Q9NQE7 514 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 KLK13Q9UKR3 277 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 NAALADL1Q9UQQ1 740 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 APOBEC2Q9Y235 224 aaKnown RBP12.39□□□□□ -0.43
UBR1-206ENST00000566493 TLR6Q9Y2C9 796 aa12.39□□□□□ -0.43
UBR1-206ENST00000566493 RNASEH1O60930 286 aaKnown RBP12.38□□□□□ -0.43
UBR1-206ENST00000566493 MOCS3O95396 460 aa12.38□□□□□ -0.43
UBR1-206ENST00000566493 SEMA4FO95754 770 aa12.38□□□□□ -0.43
UBR1-206ENST00000566493 APOEP02649 317 aa12.38□□□□□ -0.43
UBR1-206ENST00000566493 ZNF883P0CG24 379 aa12.38□□□□□ -0.43
UBR1-206ENST00000566493 ACSL1P33121 698 aa12.38□□□□□ -0.43
UBR1-206ENST00000566493 NNTQ13423 1086 aa12.38□□□□□ -0.43
UBR1-206ENST00000566493 CDH18Q13634 790 aa12.38□□□□□ -0.43
UBR1-206ENST00000566493 SUZ12Q15022 739 aaKnown RBP12.38□□□□□ -0.43
UBR1-206ENST00000566493 HLA-BQ31612 363 aa12.38□□□□□ -0.43
UBR1-206ENST00000566493 ZNF776Q68DI1 518 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms