RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 EHHADHQ08426 723 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 KCNH2Q12809 1159 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 TRIP4Q15650 581 aaPredicted RBP18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 TBC1D25Q3MII6 688 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 KMT5BQ4FZB7 885 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 FMNL3Q8IVF7 1028 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 ZNF557Q8N988 423 aaPredicted RBP18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 OR2T34Q8NGX1 318 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 TMC2Q8TDI7 906 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 RNF139Q8WU17 664 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 TSC1Q92574 1164 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 RSPH9Q9H1X1 276 aaPredicted RBP18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 FRMD4BQ9Y2L6 1034 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 PVALEFA0A1B0GWK0 134 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 A0A1W2PP55 124 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 WNT1P04628 370 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 SLFN14P0C7P3 912 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 CKMT2P17540 419 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 RHDQ02161 417 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 SHBQ15464 509 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 ZNF394Q53GI3 561 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 ADGRF1Q5T601 910 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 CEP135Q66GS9 1140 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 CACTIN-AS1Q8N1I8 211 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 ZNF248Q8NDW4 579 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 SERAC1Q96JX3 654 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 NIF3L1Q9GZT8 377 aa18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 HBS1LQ9Y450 684 aaKnown RBP18.56■□□□□ 0.56
TSPAN3-208ENST00000560514 COL6A6A6NMZ7 2263 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 TLR4O00206 839 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 SPTLC2O15270 562 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 RNASEH2AO75792 299 aaKnown RBP18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 TKTL1P51854 596 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 UCNP55089 124 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 TMPRSS3P57727 454 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 HS1BP3Q53T59 392 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 PIGZQ86VD9 579 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 SLC9A9Q8IVB4 645 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 WBP1Q96G27 269 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 NAF1Q96HR8 494 aaKnown RBP18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 UBXN6Q9BZV1 441 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 NEUROG2Q9H2A3 272 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 DMAC2Q9NW81 257 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 ADAMTS1Q9UHI8 967 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 TPX2Q9ULW0 747 aaKnown RBP18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 MAST4O15021 2626 aa18.55■□□□□ 0.56
TSPAN3-208ENST00000560514 MID1O15344 667 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 LATS1O95835 1130 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 ZBED1O96006 694 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 CASP1P29466 404 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 NASPP49321 788 aaPredicted RBP18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 PCBP4P57723 403 aaKnown RBP18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 E2F1Q01094 437 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 BNIP3Q12983 259 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 CST6Q15828 149 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 KDM7AQ6ZMT4 941 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 KIAA0907Q7Z7F0 614 aaPredicted RBP18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 ERICH1Q86X53 443 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 CCDC117Q8IWD4 279 aaPredicted RBP18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 MTG2Q9H4K7 406 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 CLMPQ9H6B4 373 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 ERVMER34-1Q9H9K5 563 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 SFMBT1Q9UHJ3 866 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 FZD4Q9ULV1 537 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 MTMR6Q9Y217 621 aa18.54■□□□□ 0.56
TSPAN3-208ENST00000560514 A0A1W2PR77 199 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 TYW5A2RUC4 315 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 POLR2DO15514 142 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 MAGEC1O60732 1142 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 TBL1XO60907 577 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 PPP6R2O75170 966 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 SIN3BO75182 1162 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 NR3C1P04150 777 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 CD70P32970 193 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 CCR5P51681 352 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 VAMP7P51809 220 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 RAB41Q5JT25 222 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 ARHGAP40Q5TG30 622 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 PCSK4Q6UW60 755 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 SND1Q7KZF4 910 aaKnown RBP eCLIP18.53■□□□□ 0.566e-6■□□□□ 9.2
TSPAN3-208ENST00000560514 MMAAQ8IVH4 418 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 DHX40Q8IX18 779 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 TTC39CQ8N584 583 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 LINC00301Q8NCQ3 95 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 OR14C36Q8NHC7 312 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 RFFLQ8WZ73 363 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 IPO9Q96P70 1041 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 ULBP1Q9BZM6 244 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 EBF2Q9HAK2 575 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 LRRC4Q9HBW1 653 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 APOBEC3GQ9HC16 384 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 SERGEFQ9UGK8 458 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 STOML2Q9UJZ1 356 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 TENM4Q6N022 2769 aa18.53■□□□□ 0.56
TSPAN3-208ENST00000560514 K7ELQ4 463 aaPredicted RBP18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 ASLP04424 464 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 SLC8A1P32418 973 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 AFMP43652 599 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 RXRGP48443 463 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms