RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 RSPH9Q9H1X1 276 aaPredicted RBP18.57■□□□□ 0.56
TSPAN3-204ENST00000558394 FRMD4BQ9Y2L6 1034 aa18.57■□□□□ 0.56
TSPAN3-204ENST00000558394 PVALEFA0A1B0GWK0 134 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 A0A1W2PP55 124 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 WNT1P04628 370 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 SLFN14P0C7P3 912 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 CKMT2P17540 419 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 RHDQ02161 417 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 SHBQ15464 509 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 C8orf34Q49A92 452 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 ZNF394Q53GI3 561 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 ADGRF1Q5T601 910 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 CEP135Q66GS9 1140 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 CACTIN-AS1Q8N1I8 211 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 ZNF248Q8NDW4 579 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 SERAC1Q96JX3 654 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 BACH2Q9BYV9 841 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 NIF3L1Q9GZT8 377 aa18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 HBS1LQ9Y450 684 aaKnown RBP18.56■□□□□ 0.56
TSPAN3-204ENST00000558394 COL6A6A6NMZ7 2263 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 TLR4O00206 839 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 SPTLC2O15270 562 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 RNASEH2AO75792 299 aaKnown RBP18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 TKTL1P51854 596 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 UCNP55089 124 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 TMPRSS3P57727 454 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 HS1BP3Q53T59 392 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 PIGZQ86VD9 579 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 SLC9A9Q8IVB4 645 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 WBP1Q96G27 269 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 NAF1Q96HR8 494 aaKnown RBP18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 UBXN6Q9BZV1 441 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 NEUROG2Q9H2A3 272 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 ZSCAN16Q9H4T2 348 aaPredicted RBP18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 DMAC2Q9NW81 257 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 ADAMTS1Q9UHI8 967 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 TPX2Q9ULW0 747 aaKnown RBP18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 MAST4O15021 2626 aa18.55■□□□□ 0.56
TSPAN3-204ENST00000558394 MID1O15344 667 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 LATS1O95835 1130 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 ZBED1O96006 694 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 SYT1P21579 422 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 CASP1P29466 404 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 NASPP49321 788 aaPredicted RBP18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 PCBP4P57723 403 aaKnown RBP18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 E2F1Q01094 437 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 BNIP3Q12983 259 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 CST6Q15828 149 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 KDM7AQ6ZMT4 941 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 KIAA0907Q7Z7F0 614 aaPredicted RBP18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 ERICH1Q86X53 443 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 CCDC117Q8IWD4 279 aaPredicted RBP18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 MTG2Q9H4K7 406 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 CLMPQ9H6B4 373 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 ERVMER34-1Q9H9K5 563 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 SFMBT1Q9UHJ3 866 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 FZD4Q9ULV1 537 aa18.54■□□□□ 0.56
TSPAN3-204ENST00000558394 A0A1W2PR77 199 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 TYW5A2RUC4 315 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 POLR2DO15514 142 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 MAGEC1O60732 1142 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 TBL1XO60907 577 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 PPP6R2O75170 966 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 SIN3BO75182 1162 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 NR3C1P04150 777 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 CD70P32970 193 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 CCR5P51681 352 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 VAMP7P51809 220 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 RAB41Q5JT25 222 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 ARHGAP40Q5TG30 622 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 PCSK4Q6UW60 755 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 SND1Q7KZF4 910 aaKnown RBP eCLIP18.53■□□□□ 0.566e-8■■□□□ 11.7
TSPAN3-204ENST00000558394 MMAAQ8IVH4 418 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 DHX40Q8IX18 779 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 TTC39CQ8N584 583 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 LINC00301Q8NCQ3 95 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 OR14C36Q8NHC7 312 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 RFFLQ8WZ73 363 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 IPO9Q96P70 1041 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 ULBP1Q9BZM6 244 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 EBF2Q9HAK2 575 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 LRRC4Q9HBW1 653 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 APOBEC3GQ9HC16 384 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 SERGEFQ9UGK8 458 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 STOML2Q9UJZ1 356 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 TENM4Q6N022 2769 aa18.53■□□□□ 0.56
TSPAN3-204ENST00000558394 ASLP04424 464 aa18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 SLC8A1P32418 973 aa18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 AFMP43652 599 aa18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 RXRGP48443 463 aa18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 NXPH1P58417 271 aa18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 DAB2P98082 770 aa18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 INSM1Q01101 510 aaPredicted RBP18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 KCNC4Q03721 635 aa18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 HNRNPA1L2Q32P51 320 aaKnown RBP18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 MPP7Q5T2T1 576 aa18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 MFN1Q8IWA4 741 aa18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 ZC3H3Q8IXZ2 948 aaKnown RBP18.52■□□□□ 0.56
TSPAN3-204ENST00000558394 DCBLD1Q8N8Z6 715 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms