RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 NECAB3Q96P71 396 aaPredicted RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 NELL2Q99435 816 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 SNRNP25Q9BV90 132 aaKnown RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 ADAM33Q9BZ11 813 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 KCNF1Q9H3M0 494 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 DHX35Q9H5Z1 703 aaKnown RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 CATSPERBQ9H7T0 1116 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 ZWILCHQ9H900 591 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 LZTFL1Q9NQ48 299 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 HPS4Q9NQG7 708 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 DDX56Q9NY93 547 aaKnown RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 GTSE1Q9NYZ3 720 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 CALCOCO1Q9P1Z2 691 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 OR12D3Q9UGF7 316 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 MUTYHQ9UIF7 546 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 VANGL2Q9ULK5 521 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 FZD10Q9ULW2 581 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 TFR2Q9UP52 801 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 AP4E1Q9UPM8 1137 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 HS3ST4Q9Y661 456 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 ALG6Q9Y672 507 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 PIAS3Q9Y6X2 628 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 KIF26AQ9ULI4 1882 aaPredicted RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 MYO18AQ92614 2054 aaKnown RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 GOLGA6L7A0A1B0GV03 622 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 A0A1B0GVM2 712 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 TCAF2A6NFQ2 919 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 MIF4GDA9UHW6 222 aaKnown RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 E9PAM4 449 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 H0Y626 953 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 H3BRJ5 948 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 ARNTLO00327 626 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 TRDMT1O14717 391 aaKnown RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 FGF10O15520 208 aaPredicted RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 DAPK3O43293 454 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 PSTPIP1O43586 416 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 GALR2O43603 387 aaPredicted RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 NARSO43776 548 aaKnown RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 CREB3O43889 395 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 CACNG3O60359 315 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 TBL1XO60907 577 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 SRGAP2O75044 1071 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 CLDN11O75508 207 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 PENKP01210 267 aaPredicted RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 RARAP10276 462 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 TYRP14679 529 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 COMTP21964 271 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 SLC6A4P31645 630 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 CTHP32929 405 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 GJA4P35212 333 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 GJC1P36383 396 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 HCAR3P49019 387 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 VCPP55072 806 aaKnown RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 CDH4P55283 916 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 TPI1P60174 286 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 ZXDAP98168 799 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 ZNF177Q13360 481 aaPredicted RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 CDH18Q13634 790 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 PDK2Q15119 407 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 MLF2Q15773 248 aaPredicted RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 PPP6R3Q5H9R7 873 aaPredicted RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 GRAMD4Q6IC98 578 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 RWDD4Q6NW29 188 aaKnown RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 FBXL22Q6P050 247 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 RFWD3Q6PCD5 774 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 ZNF852Q6ZMS4 543 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 CHST9Q7L1S5 443 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 PEX26Q7Z412 305 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 ARFGAP1Q8N6T3 406 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 UBL4BQ8N7F7 174 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 KCTD6Q8NC69 237 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 TRIM58Q8NG06 486 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 CCDC26Q8TAB7 109 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 HSPH1Q92598 858 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 TBC1D31Q96DN5 1066 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 PRMT1Q99873 361 aaKnown RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 ZYG11BQ9C0D3 744 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 CD320Q9NPF0 282 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 ARHGEF3Q9NR81 526 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 HEBP1Q9NRV9 189 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.88□□□□□ -1.15
TDP1-214ENST00000556063 RCOR3Q9P2K3 495 aaPredicted RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 DEC1Q9P2X7 70 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 PPARGC1AQ9UBK2 798 aaKnown RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 TRIM10Q9UDY6 481 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 XPO7Q9UIA9 1087 aaKnown RBP7.88□□□□□ -1.15
TDP1-214ENST00000556063 AMFRQ9UKV5 643 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 DUSP10Q9Y6W6 482 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 DOCK4Q8N1I0 1966 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 TICRRQ7Z2Z1 1910 aa7.88□□□□□ -1.15
TDP1-214ENST00000556063 IGLV3-10A0A075B6K4 115 aa7.87□□□□□ -1.15
TDP1-214ENST00000556063 CCDC66A2RUB6 948 aa7.87□□□□□ -1.15
TDP1-214ENST00000556063 GRID2IPA4D2P6 1211 aa7.87□□□□□ -1.15
TDP1-214ENST00000556063 DRGXA6NNA5 263 aa7.87□□□□□ -1.15
TDP1-214ENST00000556063 SPECC1L-ADORA2AF8WAN1 911 aa7.87□□□□□ -1.15
TDP1-214ENST00000556063 EEF2KO00418 725 aaKnown RBP7.87□□□□□ -1.15
TDP1-214ENST00000556063 GFRA2O00451 464 aa7.87□□□□□ -1.15
TDP1-214ENST00000556063 NCAM2O15394 837 aa7.87□□□□□ -1.15
TDP1-214ENST00000556063 KIF5CO60282 957 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms