RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 GTPBP2Q9BX10 602 aaKnown RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 BTBD1Q9H0C5 482 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 LHX5Q9H2C1 402 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 THAP9Q9H5L6 903 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 ABCB8Q9NUT2 735 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 SLC12A6Q9UHW9 1150 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 GGA2Q9UJY4 613 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 KMT2BQ9UMN6 2715 aaPredicted RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 KNL1Q8NG31 2342 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 CABIN1Q9Y6J0 2220 aa8.09□□□□□ -1.12
PTCSC3-201ENST00000556013 ATXN2Q99700 1313 aaKnown RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 CEP192Q8TEP8 1941 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 GTPBP10A4D1E9 387 aaKnown RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 MEI4A8MW99 385 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 M0QYV0 167 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 TSPAN3O60637 253 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 RNASEH1O60930 286 aaKnown RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 CBFA2T3O75081 653 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 MOCS3O95396 460 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 DNTTP04053 509 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 FYNP06241 537 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 SLC2A3P11169 496 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 PRKCHP24723 683 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 MAOBP27338 520 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 MATKP42679 507 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 RGS7P49802 495 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 PLK1P53350 603 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 SNX16P57768 344 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 ST8SIA6P61647 398 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 YWHAZP63104 245 aaKnown RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 SIM1P81133 766 aaPredicted RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 SULT2A1Q06520 285 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 GRIK2Q13002 908 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 PAK1Q13153 545 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 TEAD4Q15561 434 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 HNRNPA1L2Q32P51 320 aaKnown RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 TTC31Q49AM3 519 aaPredicted RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 FAM133BQ5BKY9 247 aaKnown RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 MS4A13Q5J8X5 152 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 RAB44Q7Z6P3 723 aaPredicted RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 MFN1Q8IWA4 741 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 SCUBE3Q8IX30 993 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 HJURPQ8NCD3 748 aaPredicted RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 DQX1Q8TE96 717 aaKnown RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 ERCC4Q92889 916 aaPredicted RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 SKA1Q96BD8 255 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 CDC6Q99741 560 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 SRRTQ9BXP5 876 aaKnown RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 SLC6A17Q9H1V8 727 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 RSPH9Q9H1X1 276 aaPredicted RBP8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 POPDC2Q9HBU9 364 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 PRSS16Q9NQE7 514 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 ASNSD1Q9NWL6 643 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 NCKAP1Q9Y2A7 1128 aa8.08□□□□□ -1.12
PTCSC3-201ENST00000556013 KNTC1P50748 2209 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 CKAP5Q14008 2032 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 C1QTNF9BB2RNN3 333 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 C10orf142B7Z368 130 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 CAPN9O14815 690 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 FLRT2O43155 660 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 PAPSS1O43252 624 aaPredicted RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 SH3BP5O60239 455 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 PCDHGA12O60330 932 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 TBL1XO60907 577 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 SEMA4FO95754 770 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 IGLV3-25P01717 112 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 C1QTNF9P0C862 333 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 BRD2P25440 801 aaKnown RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 CD27P26842 260 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 SLC6A4P31645 630 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 NNMTP40261 264 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 GRIA4P48058 902 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 AFF3P51826 1226 aaKnown RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 RPS14P62263 151 aaKnown RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 FNDC3BQ53EP0 1204 aaKnown RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 EFHC1Q5JVL4 640 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 ACBD5Q5T8D3 534 aaPredicted RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 ZNF776Q68DI1 518 aaPredicted RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 ISM2Q6H9L7 571 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 NADSYN1Q6IA69 706 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 KLHL10Q6JEL2 608 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 RRAGAQ7L523 313 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 ATP6V0D2Q8N8Y2 350 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 SORCS1Q8WY21 1168 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 KAT5Q92993 513 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 MYO19Q96H55 970 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 BTN2A3PQ96KV6 586 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 FCRL2Q96LA5 508 aaPredicted RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 KREMEN1Q96MU8 473 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 GAREM1Q9H706 876 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 UBE2TQ9NPD8 197 aaPredicted RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 CD93Q9NPY3 652 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 TM7SF3Q9NS93 570 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 KIAA1468Q9P260 1216 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 ADAMTS1Q9UHI8 967 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 EIF2B4Q9UI10 523 aaKnown RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 RWDD2AQ9UIY3 292 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 ZMIZ1Q9ULJ6 1067 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms