RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 MAGED2Q9UNF1 606 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-220ENST00000544550 PCDHB6Q9Y5E3 794 aa4.37□□□□□ -1.71
SNHG1-220ENST00000544550 NBEAQ8NFP9 2946 aa4.37□□□□□ -1.71
SNHG1-220ENST00000544550 IGSF10Q6WRI0 2623 aa4.37□□□□□ -1.71
SNHG1-220ENST00000544550 F5P12259 2224 aa4.37□□□□□ -1.71
SNHG1-220ENST00000544550 FREM2Q5SZK8 3169 aa4.37□□□□□ -1.71
SNHG1-220ENST00000544550 PCDH15Q96QU1 1955 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 A0A1W2PQF6 199 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 E2F8A0AVK6 867 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 ARHGEF35A5YM69 484 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 LEFTY2O00292 366 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 LAD1O00515 517 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 PAPSS1O43252 624 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-220ENST00000544550 BRINP1O60477 761 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 TADA3O75528 432 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 TOM1L1O75674 476 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 AFPP02771 609 aaKnown RBP4.36□□□□□ -1.71
SNHG1-220ENST00000544550 EDN1P05305 212 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 HDCP19113 662 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 MUTP22033 750 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 PROZP22891 400 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 PPP3CCP48454 512 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 ZNF132P52740 706 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 LILRA4P59901 499 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 TSPY1Q01534 308 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 GAD2Q05329 585 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 KDSRQ06136 332 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 MYO1EQ12965 1108 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 TARDBPQ13148 414 aaKnown RBP eCLIP4.36□□□□□ -1.71
SNHG1-220ENST00000544550 CDK5R2Q13319 367 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 ILKQ13418 452 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 NOLC1Q14978 699 aaKnown RBP eCLIP4.36□□□□□ -1.711e-323■■■■■ 29.1
SNHG1-220ENST00000544550 E2F5Q15329 346 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 DHCR24Q15392 516 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 NTRK3Q16288 839 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 CALCRLQ16602 461 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 SLC10A6Q3KNW5 377 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 ANKRD39Q53RE8 183 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 ARHGAP40Q5TG30 622 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 HES3Q5TGS1 186 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 EMC10Q5UCC4 262 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 DCAF12L1Q5VU92 463 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 CPLX2Q6PUV4 134 aaKnown RBP4.36□□□□□ -1.71
SNHG1-220ENST00000544550 FAM214BQ7L5A3 538 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 FILIP1Q7Z7B0 1213 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 CDH24Q86UP0 819 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 JAZF1Q86VZ6 243 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 ERICH1Q86X53 443 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 DHX40Q8IX18 779 aaKnown RBP4.36□□□□□ -1.71
SNHG1-220ENST00000544550 CHPFQ8IZ52 775 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 ADGRG2Q8IZP9 1017 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 FBXL16Q8N461 479 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 ARL14EPQ8N8R7 260 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-220ENST00000544550 GIMAP7Q8NHV1 300 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 ERMNQ8TAM6 284 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 IPO4Q8TEX9 1081 aaKnown RBP4.36□□□□□ -1.71
SNHG1-220ENST00000544550 LEO1Q8WVC0 666 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-220ENST00000544550 IGSF8Q969P0 613 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 OTUB2Q96DC9 234 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 SENP8Q96LD8 212 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 CEP295NLQ96MC4 621 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 TCEANC2Q96MN5 208 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 KREMEN1Q96MU8 473 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 DNAJC7Q99615 494 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 GABRG3Q99928 467 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 KIFC3Q9BVG8 833 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 DUSP23Q9BVJ7 150 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 PCED1AQ9H1Q7 454 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 LINC00597Q9H2U6 94 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 GCNT4Q9P109 453 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 DEC1Q9P2X7 70 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 ORC3Q9UBD5 711 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-220ENST00000544550 BTBD3Q9Y2F9 522 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 TMA7Q9Y2S6 64 aaKnown RBP4.36□□□□□ -1.71
SNHG1-220ENST00000544550 EML5Q05BV3 1969 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 DOCK6Q96HP0 2047 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 AKAP13Q12802 2813 aa4.36□□□□□ -1.71
SNHG1-220ENST00000544550 HELZ2Q9BYK8 2649 aaKnown RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 KIF26AQ9ULI4 1882 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 DSPP15924 2871 aaKnown RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 A0A1B0GVT2 93 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 CCDC169A6NNP5 214 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 BTBD18B2RXH4 712 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 CPLX1O14810 134 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 NPC1O15118 1278 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 YKT6O15498 198 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 CLDN3O15551 220 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 SUSD5O60279 629 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 LEFTY1O75610 366 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 LDOC1O95751 146 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 SFTPCP11686 197 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 HARSP12081 509 aaKnown RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 ETV3P41162 512 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 TNFSF9P41273 254 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 CCR10P46092 362 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 SLC6A11P48066 632 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 ZNF143P52747 638 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 INHBCP55103 352 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 RIPPLY3P57055 190 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 RNF4P78317 190 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms