RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CYP2W1Q8TAV3 490 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 STMN3Q9NZ72 180 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 NFKBIL1Q9UBC1 381 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-205ENST00000538291 A0A088AWK7 358 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 HACD1B0YJ81 288 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 FAM86B1E9PN63 330 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 LTFP02788 710 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 FAM86B2P0C5J1 330 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 TAL1P17542 331 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-205ENST00000538291 ZNF10P21506 573 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-205ENST00000538291 BDNFP23560 247 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 SERPINA4P29622 427 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 VAC14Q08AM6 782 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 SPANXN3Q5MJ09 141 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 PDPK2PQ6A1A2 396 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 PHF21BQ96EK2 531 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-205ENST00000538291 SENP6Q9GZR1 1112 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-205ENST00000538291 PCDHA3Q9Y5H8 950 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 CNOT3O75175 753 aaKnown RBP17.18■□□□□ 0.34
SCARB1-205ENST00000538291 FKBP1AP62942 108 aaKnown RBP17.18■□□□□ 0.34
SCARB1-205ENST00000538291 BEX3Q00994 111 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 DSG1Q02413 1049 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 SCUBE1Q8IWY4 988 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 GAD1Q99259 594 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 VAT1Q99536 393 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 EVA1BQ9NVM1 165 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 TAGLN3Q9UI15 199 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 TBC1D3BA6NDS4 549 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 ATP6V1C1P21283 382 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 CCDC153Q494R4 210 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 C3orf67Q6ZVT6 689 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 CACUL1Q86Y37 369 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 ADAM32Q8TC27 787 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 MTERF3Q96E29 417 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 KCTD14Q9BQ13 255 aaPredicted RBP17.17■□□□□ 0.34
SCARB1-205ENST00000538291 TBL1YQ9BQ87 522 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 A1CFQ9NQ94 594 aaKnown RBP17.17■□□□□ 0.34
SCARB1-205ENST00000538291 ABCC13Q9NSE7 274 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 COMMD8Q9NX08 183 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 CYP1A1P04798 512 aaPredicted RBP17.17■□□□□ 0.34
SCARB1-205ENST00000538291 TRAF2Q12933 501 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 ITIH4Q14624 930 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 CYP2A13Q16696 494 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 OR56A4Q8NGH8 313 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 ZNF558Q96NG5 402 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 AP4S1Q9Y587 144 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 ATP6V1B1P15313 513 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 TYMPP19971 482 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 DACT2Q5SW24 774 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 ZNF470Q6ECI4 717 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 SENP8Q96LD8 212 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 BBS4Q96RK4 519 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 MARCH2Q9P0N8 246 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 STARD13Q9Y3M8 1113 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 PPRC1Q5VV67 1664 aaKnown RBP17.17■□□□□ 0.34
SCARB1-205ENST00000538291 PABPC1P11940 636 aaKnown RBP17.17■□□□□ 0.34
SCARB1-205ENST00000538291 BGNP21810 368 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 PRKAA2P54646 552 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 USP45Q70EL2 814 aa17.17■□□□□ 0.34
SCARB1-205ENST00000538291 RECQL4O94761 1208 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 HMGCRP04035 888 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 ABCB1P08183 1280 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-205ENST00000538291 CTSEP14091 401 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 HOXB8P17481 243 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-205ENST00000538291 JAK1P23458 1154 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 PIK3CGP48736 1102 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 PAPD7Q5XG87 772 aaKnown RBP17.16■□□□□ 0.34
SCARB1-205ENST00000538291 ZBTB14O43829 449 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 CALB2P22676 271 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 ATP5C1P36542 298 aaKnown RBP17.16■□□□□ 0.34
SCARB1-205ENST00000538291 MRPS35P82673 323 aaKnown RBP17.16■□□□□ 0.34
SCARB1-205ENST00000538291 ACAP1Q15027 740 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 RCN1Q15293 331 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 RGL4Q8IZJ4 473 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 MAGEC3Q8TD91 643 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 TMEM120AQ9BXJ8 343 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 TKTL2Q9H0I9 626 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 ARHGAP20Q9P2F6 1191 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 NOS3P29474 1203 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 SERPINB3P29508 390 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 MMP13P45452 471 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 CDH8P55286 799 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 C1DQ13901 141 aaKnown RBP17.16■□□□□ 0.34
SCARB1-205ENST00000538291 UNKQ9C0B0 810 aaKnown RBP17.16■□□□□ 0.34
SCARB1-205ENST00000538291 PHACTR1Q9C0D0 580 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 POLR1EQ9GZS1 481 aaKnown RBP17.16■□□□□ 0.34
SCARB1-205ENST00000538291 HAO1Q9UJM8 370 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 MYPNQ86TC9 1320 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 NRCAMQ92823 1304 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 WDR27A2RRH5 827 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 VAPBO95292 243 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 USP17L7P0C7H9 530 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 MGAT1P26572 445 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 ELK3P41970 407 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 KCNMA1Q12791 1236 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 GNA13Q14344 377 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 MILR1Q7Z6M3 343 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms