RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 GAKO14976 1311 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 RBAK-RBAKDNI3L0D1 243 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 LDLRP01130 860 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 IFNA14P01570 189 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 NAA20P61599 178 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 TP53BP2Q13625 1128 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 C9orf131Q5VYM1 1079 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 IRF2BP2Q7Z5L9 587 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 NSMCE2Q96MF7 247 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 GBA2Q9HCG7 927 aaPredicted RBP15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 KCNMB3Q9NPA1 279 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 ERI2A8K979 691 aaKnown RBP15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 BAIAP3O94812 1187 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 PAX3P23760 479 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 MRPS22P82650 360 aaKnown RBP15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 PPP3CAQ08209 521 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 C9orf16Q9BUW7 83 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 AP3M1Q9Y2T2 418 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 CD151P48509 253 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 HPCAP84074 193 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 COL9A3Q14050 684 aaPredicted RBP15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 ARMC6Q6NXE6 501 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 OTOAQ7RTW8 1153 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 SAMD7Q7Z3H4 446 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 PPP1R10Q96QC0 940 aaKnown RBP15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 A1CFQ9NQ94 594 aaKnown RBP15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 KANSL3Q9P2N6 904 aa15.78■□□□□ 0.12
PCDHA4-203ENST00000530339 COL5A2P05997 1499 aaPredicted RBP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 EML1O00423 815 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 PHGDHO43175 533 aaKnown RBP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 GLP2RO95838 553 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 TTKP33981 857 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 AMHR2Q16671 573 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 FAM98BQ52LJ0 330 aaKnown RBP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 DHDDSQ86SQ9 333 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 PALB2Q86YC2 1186 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 KAT5Q92993 513 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 FBXO32Q969P5 355 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 SLC25A23Q9BV35 468 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 ZCWPW1Q9H0M4 648 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 COMMD8Q9NX08 183 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 ABI2Q9NYB9 513 aaPredicted RBP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 POLG2Q9UHN1 485 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 LIASO43766 372 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 OCM2P0CE71 109 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 OCMP0CE72 109 aaPredicted RBP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 MGAT1P26572 445 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 HOXA10P31260 410 aaPredicted RBP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 PCBP1Q15365 356 aaKnown RBP eCLIP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 CCDC142Q17RM4 750 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 KCNMB4Q86W47 210 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 DHRSXQ8N5I4 330 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 FBXO44Q9H4M3 255 aa15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 STN1Q9H668 368 aaKnown RBP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 KRCC1Q9NPI7 259 aaPredicted RBP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 CAB39Q9Y376 341 aaPredicted RBP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 COPG1Q9Y678 874 aaKnown RBP15.77■□□□□ 0.12
PCDHA4-203ENST00000530339 INPP4BO15327 924 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 ANPEPP15144 967 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 CHKAP35790 457 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 RPL5P46777 297 aaKnown RBP15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 RXRGP48443 463 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 MARCKSL1P49006 195 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 TRAF2Q12933 501 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 C1orf186Q6ZWK4 172 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 PHACTR1Q9C0D0 580 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 DMAP1Q9NPF5 467 aaPredicted RBP15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 NDUFAF1Q9Y375 327 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 F8VP50 259 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 FSCN2O14926 492 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 MT-CO1P00395 513 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 MIPP30301 263 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 EPHX2P34913 555 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 PPP3CCP48454 512 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 CNTN1Q12860 1018 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 CYP51A1Q16850 503 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 HERC6Q8IVU3 1022 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 FICDQ9BVA6 458 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 SLCO1B3Q9NPD5 702 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 SCUBE2Q9NQ36 999 aa15.77■□□□□ 0.11
PCDHA4-203ENST00000530339 ASTN1O14525 1302 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 SLIT3O75094 1523 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 EDF1O60869 148 aaKnown RBP15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 NEDD8Q15843 81 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 FAM117BQ6P1L5 589 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 FAM71AQ8IYT1 594 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 NMRAL1Q9HBL8 299 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 IPPQ9Y573 584 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 CHADO15335 359 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 B3GAT3O94766 335 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 PDK3Q15120 406 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 ARMCX4Q5H9R4 360 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 SLC27A1Q6PCB7 646 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 PLEKHM3Q6ZWE6 761 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 SEPT8Q92599 483 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 SEPHS2Q99611 448 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 CLPBQ9H078 707 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 SPATC1LQ9H0A9 340 aa15.76■□□□□ 0.11
PCDHA4-203ENST00000530339 CCR1P32246 355 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms