RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 J3QKU1 62 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 WNT9AO14904 365 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 PPP6R2O75170 966 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 POLR2EP19388 210 aaKnown RBP13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 CD38P28907 300 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 EPHA8P29322 1005 aaPredicted RBP13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 CD70P32970 193 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 SGSHP51688 502 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 TKTL1P51854 596 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 ZNF445P59923 1031 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 TLE3Q04726 772 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 PCSK4Q6UW60 755 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 USP30Q70CQ3 517 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 GRAMD1CQ8IYS0 662 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 KIAA0895Q8NCT3 520 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 WFDC5Q8TCV5 224 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 TAS1R2Q8TE23 839 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 TSC1Q92574 1164 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 TMEM176AQ96HP8 235 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 ULBP1Q9BZM6 244 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 ZSCAN16Q9H4T2 348 aaPredicted RBP13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 UPF2Q9HAU5 1272 aaKnown RBP13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 SFMBT1Q9UHJ3 866 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 FRMD4BQ9Y2L6 1034 aa13.55□□□□□ -0.24
CLNS1A-207ENST00000527133 MYO18BQ8IUG5 2567 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 A0A1W2PP55 124 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 LRRC72A6NJI9 287 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 CYSRT1A8MQ03 144 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 MID1O15344 667 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 YKT6O15498 198 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 CUTAO60888 179 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 SIN3BO75182 1162 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 RNASEH2AO75792 299 aaKnown RBP13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 ZBED1O96006 694 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 TRIM49P0CI25 452 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 TRIM49CP0CI26 452 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 GLDCP23378 1020 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 ACTN2P35609 894 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 GCLMP48507 274 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 ARRB1P49407 418 aaPredicted RBP13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 VAMP7P51809 220 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 STK4Q13043 487 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 KCNJ12Q14500 433 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 CST6Q15828 149 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 RAB41Q5JT25 222 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 ADGRF1Q5T601 910 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 ERICH6BQ5W0A0 696 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 SPACA3Q8IXA5 215 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 RNF139Q8WU17 664 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 TMEM174Q8WUU8 243 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 EDEM1Q92611 657 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 UBXN6Q9BZV1 441 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 NEUROG2Q9H2A3 272 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 KCTD10Q9H3F6 313 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 MMRN2Q9H8L6 949 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 OLA1Q9NTK5 396 aaKnown RBP13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 STOML2Q9UJZ1 356 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 SCML1Q9UN30 329 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 HBS1LQ9Y450 684 aaKnown RBP13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 HECTD1Q9ULT8 2610 aa13.54□□□□□ -0.24
CLNS1A-207ENST00000527133 A0A1W2PR77 199 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 MSI1O43347 362 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 TBL1XO60907 577 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 RNASEH1O60930 286 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 SLC8A3P57103 927 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 ST8SIA6P61647 398 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 PPP3CAQ08209 521 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 SFSWAPQ12872 951 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 BNIP3Q12983 259 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 ILKQ13418 452 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 TAF1BQ53T94 588 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 PM20D1Q6GTS8 502 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 RFWD3Q6PCD5 774 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 BHLHA9Q7RTU4 235 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 ERICH1Q86X53 443 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 MMAAQ8IVH4 418 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 DHX40Q8IX18 779 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 CCDC150Q8NCX0 1101 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 OR2T34Q8NGX1 318 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 NAF1Q96HR8 494 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 SERAC1Q96JX3 654 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 LGMNQ99538 433 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 OMDQ99983 421 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 EXOC1Q9NV70 894 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 CLCA2Q9UQC9 943 aa13.53□□□□□ -0.24
CLNS1A-207ENST00000527133 CAPN8A6NHC0 703 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 ERVH48-1M5A8F1 160 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 TLR4O00206 839 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 TULP2O00295 520 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 PDXKO00764 312 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 KLRC4O43908 158 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 LATS1O95835 1130 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 SLFN14P0C7P3 912 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 CKMT2P17540 419 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 CCR5P51681 352 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 NXPH1P58417 271 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 INSM1Q01101 510 aaPredicted RBP13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 KCNH2Q12809 1159 aa13.52□□□□□ -0.25
CLNS1A-207ENST00000527133 HNRNPA1L2Q32P51 320 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 228.3 ms