RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 CITO14578 2027 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SZT2Q5T011 3432 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TSC2P49815 1807 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ANK1P16157 1881 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GOLGA6L3A6NEY3 463 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FADS2P1A8MWK0 482 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GRXCR1A8MXD5 290 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FAM47E-STBD1D6RA91 191 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 F8VZ95 297 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CYB561D2O14569 222 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NCK2O43639 380 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LPXNO60711 386 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TADA2AO75478 443 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GFPT2O94808 682 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NOL4O94818 638 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RASGRP1O95267 797 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PRNPP04156 253 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GYPCP04921 128 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RNASE1P07998 156 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KRT19P08727 400 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PAEPP09466 180 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CCDC172P0C7W6 258 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 JMJD7P0C870 316 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SETSIPP0DME0 302 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 COL6A2P12110 1019 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MYOGP15173 224 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ATF2P15336 505 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KRT15P19012 456 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ACO1P21399 889 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TACR1P25103 407 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ITGB7P26010 798 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TKTP29401 623 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HOXA9P31269 272 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CDH5P33151 784 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GDNFP39905 211 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PBX3P40426 434 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PRKCIP41743 596 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MAGEA11P43364 429 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 BRCC3P46736 316 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MASP1P48740 699 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NDUFV1P49821 464 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MRE11P49959 708 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GALK1P51570 392 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GUCY2FP51841 1108 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RABGGTBP53611 331 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MFAP3P55082 362 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GP2P55259 537 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 UBASH3AP57075 661 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 JAM2P57087 298 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 BPIFB4P59827 614 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GPR85P60893 370 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TNNC1P63316 161 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZBED6P86452 979 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TSPY1Q01534 308 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 UBXN1Q04323 297 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KCNAB2Q13303 367 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GPR17Q13304 367 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GPM6BQ13491 265 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CUL2Q13617 745 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KCNC3Q14003 757 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CAMK1Q14012 370 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LRP8Q14114 963 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SMC1AQ14683 1233 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KIR3DS1Q14943 382 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NR1I3Q14994 352 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SYCP1Q15431 976 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 STILQ15468 1287 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MAPRE1Q15691 268 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PSMD5Q16401 504 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CRY1Q16526 586 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PTPROQ16827 1216 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SOWAHAQ2M3V2 549 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HSF5Q4G112 596 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HABP4Q5JVS0 413 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SPOUT1Q5T280 376 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ACBD5Q5T8D3 534 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KLHDC7AQ5VTJ3 777 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FAM171A1Q5VUB5 890 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 WSCD1Q658N2 575 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TPGS2Q68CL5 300 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ARHGAP17Q68EM7 881 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SPECC1LQ69YQ0 1117 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PPP1R2P3Q6NXS1 205 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FAM171BQ6P995 826 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 VSTM1Q6UX27 236 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RSPO2Q6UXX9 243 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CYP26C1Q6V0L0 522 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DSTYKQ6XUX3 929 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TMEM184AQ6ZMB5 413 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 C4orf50Q6ZRC1 276 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MAMDC2Q7Z304 686 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FGD2Q7Z6J4 655 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TMCO2Q7Z6W1 182 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 METTL23Q86XA0 190 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZNF677Q86XU0 584 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 VSTM4Q8IW00 320 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CCDC103Q8IW40 242 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FAM71AQ8IYT1 594 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DCP1BQ8IZD4 617 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ADGRF2Q8IZF7 708 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms