RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 E9PAM4 449 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 NEDD8-MDP1E9PL57 170 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 ARNTLO00327 626 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 DAPK3O43293 454 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 PSTPIP1O43586 416 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 TSPAN3O60637 253 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 SRGAP2O75044 1071 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 CLDN11O75508 207 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 CETN2P41208 172 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 KRT81Q14533 505 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 PDK2Q15119 407 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 NADSYN1Q6IA69 706 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 FBXL22Q6P050 247 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 PEX26Q7Z412 305 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 TMEM25Q86YD3 366 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 ARFGAP1Q8N6T3 406 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 KCTD6Q8NC69 237 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 CCDC26Q8TAB7 109 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 HSPH1Q92598 858 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 TBC1D31Q96DN5 1066 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 ASIC4Q96FT7 647 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 PRMT1Q99873 361 aaKnown RBP20.73■□□□□ 0.91
USP53-203ENST00000507597 SNRNP25Q9BV90 132 aaKnown RBP20.73■□□□□ 0.91
USP53-203ENST00000507597 GTSE1Q9NYZ3 720 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 PRUNE2Q8WUY3 3088 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 A0A1B0GVM2 712 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 CCDC66A2RUB6 948 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 TCAF2A6NFQ2 919 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 MIF4GDA9UHW6 222 aaKnown RBP20.72■□□□□ 0.91
USP53-203ENST00000507597 H3BRJ5 948 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 TBL1XO60907 577 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 MOCS3O95396 460 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 TYRP14679 529 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 CDH4P55283 916 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 SLC25A11Q02978 314 aaKnown RBP20.72■□□□□ 0.91
USP53-203ENST00000507597 TNK2Q07912 1038 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 C5orf22Q49AR2 442 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 RFWD3Q6PCD5 774 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 CHST9Q7L1S5 443 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 UBL4BQ8N7F7 174 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 ZYG11BQ9C0D3 744 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 RCOR3Q9P2K3 495 aaPredicted RBP20.72■□□□□ 0.91
USP53-203ENST00000507597 DEC1Q9P2X7 70 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 XPO7Q9UIA9 1087 aaKnown RBP20.72■□□□□ 0.91
USP53-203ENST00000507597 MUTYHQ9UIF7 546 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.72■□□□□ 0.91
USP53-203ENST00000507597 PIAS3Q9Y6X2 628 aa20.72■□□□□ 0.91
USP53-203ENST00000507597 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.71■□□□□ 0.91
USP53-203ENST00000507597 DRGXA6NNA5 263 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 H0Y626 953 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 FGF10O15520 208 aaPredicted RBP20.71■□□□□ 0.91
USP53-203ENST00000507597 DCXO43602 365 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 NARSO43776 548 aaKnown RBP20.71■□□□□ 0.91
USP53-203ENST00000507597 CREB3O43889 395 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 KIF5CO60282 957 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 PALMO75781 387 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 PENKP01210 267 aaPredicted RBP20.71■□□□□ 0.91
USP53-203ENST00000507597 RARAP10276 462 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 SLC6A4P31645 630 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 GJA4P35212 333 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 HCAR3P49019 387 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 TPI1P60174 286 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 ZXDAP98168 799 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 ZNF177Q13360 481 aaPredicted RBP20.71■□□□□ 0.91
USP53-203ENST00000507597 MLF2Q15773 248 aaPredicted RBP20.71■□□□□ 0.91
USP53-203ENST00000507597 DPYSL2Q16555 572 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 RAB6CQ53S08 254 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 RWDD4Q6NW29 188 aaKnown RBP20.71■□□□□ 0.91
USP53-203ENST00000507597 ZNF852Q6ZMS4 543 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 NELL2Q99435 816 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 RAB6CQ9H0N0 254 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 PRDM16Q9HAZ2 1276 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.71■□□□□ 0.91
USP53-203ENST00000507597 SALL4Q9UJQ4 1053 aa20.71■□□□□ 0.91
USP53-203ENST00000507597 TCF20Q9UGU0 1960 aaKnown RBP20.71■□□□□ 0.91
USP53-203ENST00000507597 IGLV3-10A0A075B6K4 115 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 SPECC1L-ADORA2AF8WAN1 911 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 EEF2KO00418 725 aaKnown RBP20.7■□□□□ 0.9
USP53-203ENST00000507597 TRDMT1O14717 391 aaKnown RBP20.7■□□□□ 0.9
USP53-203ENST00000507597 CACNG3O60359 315 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 EPHB2P29323 1055 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 GJC1P36383 396 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 VCPP55072 806 aaKnown RBP20.7■□□□□ 0.9
USP53-203ENST00000507597 CDH6P55285 790 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 SLC12A1Q13621 1099 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 CDH18Q13634 790 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 SMTNL2Q2TAL5 461 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 PPP6R3Q5H9R7 873 aaPredicted RBP20.7■□□□□ 0.9
USP53-203ENST00000507597 FYB2Q5VWT5 728 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 VSIG1Q86XK7 387 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 MFN1Q8IWA4 741 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 CD101Q93033 1021 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 MAK16Q9BXY0 300 aaKnown RBP20.7■□□□□ 0.9
USP53-203ENST00000507597 ARHGEF3Q9NR81 526 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 HEBP1Q9NRV9 189 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 KIAA1522Q9P206 1035 aaPredicted RBP20.7■□□□□ 0.9
USP53-203ENST00000507597 TRIM10Q9UDY6 481 aa20.7■□□□□ 0.9
USP53-203ENST00000507597 SPTBN5Q9NRC6 3674 aaKnown RBP20.7■□□□□ 0.9
USP53-203ENST00000507597 GRID2IPA4D2P6 1211 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 GFRA2O00451 464 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms