RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TMEM191CA6NGB0 347 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 HPGDP15428 266 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 PECAM1P16284 738 aaPredicted RBP20.56■□□□□ 0.88
RNF40-203ENST00000493683 EIF4BP23588 611 aaKnown RBP20.56■□□□□ 0.88
RNF40-203ENST00000493683 THPOP40225 353 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 BACE1P56817 501 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 SLC5A5Q92911 643 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 TLR10Q9BXR5 811 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 SPRTNQ9H040 489 aaPredicted RBP20.56■□□□□ 0.88
RNF40-203ENST00000493683 NFIL3Q16649 462 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 ARMC3Q5W041 872 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 KIAA0895Q8NCT3 520 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 LMTK2Q8IWU2 1503 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 APOC4-APOC2K7ER74 178 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 APOC2P02655 101 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 EFEMP1Q12805 493 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 TRIM25Q14258 630 aaKnown RBP20.55■□□□□ 0.88
RNF40-203ENST00000493683 EXOC3L1Q86VI1 746 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 ZNF184Q99676 751 aaPredicted RBP20.55■□□□□ 0.88
RNF40-203ENST00000493683 A1CFQ9NQ94 594 aaKnown RBP20.55■□□□□ 0.88
RNF40-203ENST00000493683 CNPP09543 421 aaKnown RBP20.55■□□□□ 0.88
RNF40-203ENST00000493683 HSMCR30P0CW71 290 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 ORC1Q13415 861 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 CNGA2Q16280 664 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 C2CD6Q53TS8 623 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 PTAR1Q7Z6K3 402 aaPredicted RBP20.55■□□□□ 0.88
RNF40-203ENST00000493683 EMC1Q8N766 993 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 ZNF398Q8TD17 642 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 FIG4Q92562 907 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 ATAD3AQ9NVI7 634 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 SPATA31A1Q5TZJ5 1347 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 ATAD3BQ5T9A4 648 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 MPP4Q96JB8 637 aa20.55■□□□□ 0.88
RNF40-203ENST00000493683 MAP3K6O95382 1288 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 TYW3Q6IPR3 259 aaKnown RBP20.54■□□□□ 0.88
RNF40-203ENST00000493683 APOL2Q9BQE5 337 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 CNGB3Q9NQW8 809 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 ARHGAP28Q9P2N2 729 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 KANSL3Q9P2N6 904 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 NRXN1Q9ULB1 1477 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 PTPN3P26045 913 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 AXLP30530 894 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 RAP1GAPP47736 663 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 PSMC6P62333 389 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 LAMTOR4Q0VGL1 99 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 IKBIPQ70UQ0 350 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 ITIH5Q86UX2 942 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 SERPINB11Q96P15 392 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 POP1Q99575 1024 aaKnown RBP20.54■□□□□ 0.88
RNF40-203ENST00000493683 PHACTR1Q9C0D0 580 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 IFRD1O00458 451 aaPredicted RBP20.54■□□□□ 0.88
RNF40-203ENST00000493683 RARAP10276 462 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 GRIK3Q13003 919 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 CDC73Q6P1J9 531 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 TMC5Q6UXY8 1006 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 NECAB2Q7Z6G3 386 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 AADATQ8N5Z0 425 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 MYLK2Q9H1R3 596 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 KLHL31Q9H511 634 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 VPS51Q9UID3 782 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 PPP2R3BQ9Y5P8 575 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 INPP4BO15327 924 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 EPHB3P54753 998 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 SPANXN2Q5MJ10 180 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 FAM126BQ8IXS8 530 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 FNDC5Q8NAU1 212 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 HMG20AQ9NP66 347 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 MAN1C1Q9NR34 630 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 DPP7Q9UHL4 492 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 FRMPD4Q14CM0 1322 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 MEI4A8MW99 385 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 C16orf72Q14CZ0 275 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 NDUFA5Q16718 116 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 PLEKHH3Q7Z736 793 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 UTP15Q8TED0 518 aaKnown RBP20.54■□□□□ 0.88
RNF40-203ENST00000493683 TSPAN16Q9UKR8 245 aa20.54■□□□□ 0.88
RNF40-203ENST00000493683 WDR27A2RRH5 827 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 RGS14O43566 566 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 RAMP2O60895 175 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 SMNDC1O75940 238 aaKnown RBP eCLIP20.53■□□□□ 0.88
RNF40-203ENST00000493683 MYL4P12829 197 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 YWHAZP63104 245 aaKnown RBP20.53■□□□□ 0.88
RNF40-203ENST00000493683 BFSP2Q13515 415 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 TLK2Q86UE8 772 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 PANX3Q96QZ0 392 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 SYT15Q9BQS2 421 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 PDCD2LQ9BRP1 358 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 HK2P52789 917 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 MTSS1LQ765P7 747 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 SPPL2AQ8TCT8 520 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 MID1IP1Q9NPA3 183 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 TNPO3Q9Y5L0 923 aaKnown RBP20.53■□□□□ 0.88
RNF40-203ENST00000493683 CCNT2O60583 730 aaKnown RBP20.53■□□□□ 0.88
RNF40-203ENST00000493683 MYL12AP19105 171 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 C21orf59P57076 290 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 TRAF3Q13114 568 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 MSL3Q8N5Y2 521 aaKnown RBP20.53■□□□□ 0.88
RNF40-203ENST00000493683 TBL1YQ9BQ87 522 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 C1orf50Q9BV19 199 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms