RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 PTP4A2Q12974 167 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 ITGA9Q13797 1035 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 CCNIQ14094 377 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 GRM3Q14832 879 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 FAXCQ5TGI0 409 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 ARHGEF16Q5VV41 709 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 ATG16L1Q676U5 607 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 AAGABQ6PD74 315 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 MON1BQ7L1V2 547 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 METTL25Q8N6Q8 603 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 PRPF18Q99633 342 aaKnown RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 CCDC106Q9BWC9 280 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 MRPL1Q9BYD6 325 aaKnown RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 C20orf27Q9GZN8 174 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 TMEM8AQ9HCN3 771 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 PIH1D1Q9NWS0 290 aaKnown RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 ZDHHC7Q9NXF8 308 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 ZNF541Q9H0D2 1346 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 TCRBV9S1A1TA0A576 114 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 KBTBD13C9JR72 458 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 TMEM63AO94886 807 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 FUT4P22083 530 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 ABCD1P33897 745 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 HTR3AP46098 478 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 EIF1AXP47813 144 aaKnown RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 DCTN2Q13561 401 aaKnown RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 GK3PQ14409 553 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 CNGA3Q16281 694 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 MYLK3Q32MK0 819 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 TM4SF20Q53R12 229 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 LRRC8BQ6P9F7 803 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 RSPH3Q86UC2 560 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 CDR2LQ86X02 465 aaPredicted RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 VPS45Q9NRW7 570 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 CIDEBQ9UHD4 219 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 PCDHB2Q9Y5E7 798 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 VWA5AO00534 786 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 DKC1O60832 514 aaKnown RBP eCLIP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 ZNF189O75820 626 aaPredicted RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 WEE2P0C1S8 567 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 NPTX2P47972 431 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 GPC3P51654 580 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 GTF2BQ00403 316 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 OASLQ15646 514 aaKnown RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 HSP90AA5PQ58FG0 334 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 DCUN1D2Q6PH85 259 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 TMEM270Q6UE05 265 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 KYAT3Q6YP21 454 aaKnown RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 C11orf74Q86VG3 221 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 ARL6IP6Q8N6S5 226 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 ACTL9Q8TC94 416 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 POF1BQ8WVV4 589 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 MCEEQ96PE7 176 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 SIKE1Q9BRV8 207 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 DHRS4Q9BTZ2 278 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 RNF146Q9NTX7 359 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 HACL1Q9UJ83 578 aa10.43□□□□□ -0.74
COMMD4-203ENST00000480484 FAF1Q9UNN5 650 aaPredicted RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 HEMK1Q9Y5R4 338 aaPredicted RBP10.43□□□□□ -0.74
COMMD4-203ENST00000480484 NFKBIEO00221 500 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 ADCY3O60266 1144 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 GTF2H1P32780 548 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 CPOXP36551 454 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 FDFT1P37268 417 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 OTUD4Q01804 1114 aaKnown RBP10.42□□□□□ -0.74
COMMD4-203ENST00000480484 CCDC142Q17RM4 750 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 GFOD2Q3B7J2 385 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 ATG14Q6ZNE5 492 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 ZNF554Q86TJ5 538 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 DEFB107AQ8IZN7 70 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 TMEM161BQ8NDZ6 487 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 FEZF2Q8TBJ5 459 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 LZICQ8WZA0 190 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 SPON2Q9BUD6 331 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 MAGEB5Q9BZ81 275 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 UBAP1Q9NZ09 502 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 POLIQ9UNA4 740 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 MAD1L1Q9Y6D9 718 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 SNCAIPQ9Y6H5 919 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 AK5Q9Y6K8 562 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 PMM2O15305 246 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 NCF2P19878 526 aaPredicted RBP10.42□□□□□ -0.74
COMMD4-203ENST00000480484 RPL22P35268 128 aaKnown RBP10.42□□□□□ -0.74
COMMD4-203ENST00000480484 ALDH1A3P47895 512 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 COPAP53621 1224 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 HMGCS2P54868 508 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 NLRP11P59045 1033 aaKnown RBP10.42□□□□□ -0.74
COMMD4-203ENST00000480484 PPIDQ08752 370 aaKnown RBP10.42□□□□□ -0.74
COMMD4-203ENST00000480484 TBL3Q12788 808 aaKnown RBP10.42□□□□□ -0.74
COMMD4-203ENST00000480484 TCEA2Q15560 299 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 FAM91A1Q658Y4 838 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 NPNTQ6UXI9 565 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 DLK2Q6UY11 383 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 NIPA1Q7RTP0 329 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 EMC1Q8N766 993 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 FAM71DQ8N9W8 422 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 GAB3Q8WWW8 586 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 LPAR1Q92633 364 aa10.42□□□□□ -0.74
COMMD4-203ENST00000480484 ZMAT2Q96NC0 199 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms