RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 GLDCP23378 1020 aa21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 HARS2P49590 506 aaKnown RBP21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 KCNJ12Q14500 433 aa21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 TAF1BQ53T94 588 aaPredicted RBP21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 RAB41Q5JT25 222 aa21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 GANCQ8TET4 914 aa21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 IMPG2Q9BZV3 1241 aa21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 NIF3L1Q9GZT8 377 aa21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 MAGEF1Q9HAY2 307 aa21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 APOBEC3GQ9HC16 384 aaKnown RBP21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 CLCA2Q9UQC9 943 aa21.11■□□□□ 0.97
PDLIM1-202ENST00000477757 LRRC72A6NJI9 287 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 IKBKBO14920 756 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 LATS1O95835 1130 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 CD58P19256 250 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 NXPH1P58417 271 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 RHDQ02161 417 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 KANSL1Q7Z3B3 1105 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 OR2T34Q8NGX1 318 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 TMA16Q96EY4 203 aaKnown RBP21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 LGMNQ99538 433 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 DNAI2Q9GZS0 605 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 MTG2Q9H4K7 406 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 ADAMTS1Q9UHI8 967 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 FZD4Q9ULV1 537 aa21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 HBS1LQ9Y450 684 aaKnown RBP21.1■□□□□ 0.97
PDLIM1-202ENST00000477757 CKMT2P17540 419 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 POLR2EP19388 210 aaKnown RBP21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 CASP1P29466 404 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 RXRGP48443 463 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 CCR5P51681 352 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 INSM1Q01101 510 aaPredicted RBP21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 KCNH2Q12809 1159 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 SFSWAPQ12872 951 aaKnown RBP21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 C1orf220Q5T0J3 134 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 ADGRF1Q5T601 910 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 BHLHA9Q7RTU4 235 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 PIGZQ86VD9 579 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 FMNL3Q8IVF7 1028 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 OXR1Q8N573 874 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 WFDC5Q8TCV5 224 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 MYO19Q96H55 970 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 UBXN6Q9BZV1 441 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 BLZF1Q9H2G9 400 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 ERVMER34-1Q9H9K5 563 aa21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 OLA1Q9NTK5 396 aaKnown RBP21.09■□□□□ 0.97
PDLIM1-202ENST00000477757 PVALEFA0A1B0GWK0 134 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 A0A1W2PP55 124 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 WNT9AO14904 365 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 RNASEH1O60930 286 aaKnown RBP21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 SYT1P21579 422 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 CD70P32970 193 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 SGSHP51688 502 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 UCNP55089 124 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 CUL4AQ13619 759 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 STK38Q15208 465 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 CST6Q15828 149 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 HNRNPA1L2Q32P51 320 aaKnown RBP21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 MPP7Q5T2T1 576 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 PM20D1Q6GTS8 502 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 LINC00301Q8NCQ3 95 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 ZNF248Q8NDW4 579 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 CLMPQ9H6B4 373 aa21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 TPX2Q9ULW0 747 aaKnown RBP21.08■□□□□ 0.97
PDLIM1-202ENST00000477757 TLR4O00206 839 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 MID1O15344 667 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 SIN3BO75182 1162 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 ZBED1O96006 694 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 SLFN14P0C7P3 912 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 ACP1P24666 158 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 PCBP4P57723 403 aaKnown RBP21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 TMPRSS3P57727 454 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 BNIP3Q12983 259 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 ARID5BQ14865 1188 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 PKDCCQ504Y2 493 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 SLC45A4Q5BKX6 768 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 HIC2Q96JB3 615 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 SERAC1Q96JX3 654 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 NEUROG2Q9H2A3 272 aa21.07■□□□□ 0.96
PDLIM1-202ENST00000477757 RNASEH2AO75792 299 aaKnown RBP21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 NR3C1P04150 777 aa21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 TKTL1P51854 596 aa21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 ST8SIA6P61647 398 aa21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 PROX2Q3B8N5 592 aa21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 ZNF557Q8N988 423 aaPredicted RBP21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 TAS1R2Q8TE23 839 aa21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 TTC17Q96AE7 1141 aa21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 IRX2Q9BZI1 471 aaPredicted RBP21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 ULBP1Q9BZM6 244 aa21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 SEMA4CQ9C0C4 833 aa21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 KCTD10Q9H3F6 313 aa21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 ARID1BQ8NFD5 2236 aaPredicted RBP21.06■□□□□ 0.96
PDLIM1-202ENST00000477757 NYNRINQ9P2P1 1898 aaKnown RBP21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 SPTLC2O15270 562 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 PPP6R2O75170 966 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 ASLP04424 464 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 ADPRHP54922 357 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 ZNF394Q53GI3 561 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 BROXQ5VW32 411 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 SHC4Q6S5L8 630 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms