RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 YWHAGP61981 247 aaKnown RBP eCLIP11.86□□□□□ -0.51
BRCA1-213ENST00000476777 ILKQ13418 452 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 KCNJ12Q14500 433 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 TBC1D25Q3MII6 688 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 C1orf220Q5T0J3 134 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 MBLAC2Q68D91 279 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 AHI1Q8N157 1196 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 ARHGAP18Q8N392 663 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 IQUBQ8NA54 791 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 GOLGA5Q8TBA6 731 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 GANCQ8TET4 914 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 TMEM174Q8WUU8 243 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 RFFLQ8WZ73 363 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 SKA1Q96BD8 255 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 MTG2Q9H4K7 406 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 CYP3A43Q9HB55 503 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 FBXL12Q9NXK8 326 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 SUN2Q9UH99 717 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 STOML2Q9UJZ1 356 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 SCML1Q9UN30 329 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 NCKAP1Q9Y2A7 1128 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 UBR5O95071 2799 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-213ENST00000476777 DOCK9Q9BZ29 2069 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 IKBKBO14920 756 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 ATP5BP06576 529 aaKnown RBP11.85□□□□□ -0.51
BRCA1-213ENST00000476777 CD58P19256 250 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 CD38P28907 300 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 PIK3CAP42336 1068 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 NASPP49321 788 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-213ENST00000476777 ARRB1P49407 418 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-213ENST00000476777 HARS2P49590 506 aaKnown RBP11.85□□□□□ -0.51
BRCA1-213ENST00000476777 SGSHP51688 502 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 ZNF445P59923 1031 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 KCNH2Q12809 1159 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 BNIP3Q12983 259 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 TAF1BQ53T94 588 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-213ENST00000476777 RAB41Q5JT25 222 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 SFMBT2Q5VUG0 894 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 SLC9A9Q8IVB4 645 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 FMNL3Q8IVF7 1028 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 DCBLD1Q8N8Z6 715 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 WFDC5Q8TCV5 224 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 TMC2Q8TDI7 906 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 TMA16Q96EY4 203 aaKnown RBP11.85□□□□□ -0.51
BRCA1-213ENST00000476777 WBP1Q96G27 269 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 MYO19Q96H55 970 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 BACH2Q9BYV9 841 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 UBXN6Q9BZV1 441 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 NEUROG2Q9H2A3 272 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 BLZF1Q9H2G9 400 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 GDF3Q9NR23 364 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 AASDHPPTQ9NRN7 309 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 CLCA2Q9UQC9 943 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 SPTAN1Q13813 2472 aaKnown RBP11.85□□□□□ -0.51
BRCA1-213ENST00000476777 NBASA2RRP1 2371 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 DOPEY2Q9Y3R5 2298 aa11.85□□□□□ -0.51
BRCA1-213ENST00000476777 PVALEFA0A1B0GWK0 134 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 A0A1W2PP55 124 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 LRRC72A6NJI9 287 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 TLR4O00206 839 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 NEFLP07196 543 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 CKMT2P17540 419 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 POLR2EP19388 210 aaKnown RBP11.84□□□□□ -0.51
BRCA1-213ENST00000476777 SYT1P21579 422 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 GLDCP23378 1020 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 CD70P32970 193 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 RXRGP48443 463 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 CCR5P51681 352 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 NXPH1P58417 271 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 INSM1Q01101 510 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-213ENST00000476777 CUL4AQ13619 759 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 ADGRF1Q5T601 910 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 PM20D1Q6GTS8 502 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 BHLHA9Q7RTU4 235 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 KANSL1Q7Z3B3 1105 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 PIGZQ86VD9 579 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 LINC00301Q8NCQ3 95 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 OR2T34Q8NGX1 318 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 NDRG1Q92597 394 aaKnown RBP11.84□□□□□ -0.51
BRCA1-213ENST00000476777 LMLNQ96KR4 655 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 SEMA4CQ9C0C4 833 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 ERVMER34-1Q9H9K5 563 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 ADAMTS1Q9UHI8 967 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 HBS1LQ9Y450 684 aaKnown RBP11.84□□□□□ -0.51
BRCA1-213ENST00000476777 NOTCH2Q04721 2471 aa11.84□□□□□ -0.51
BRCA1-213ENST00000476777 TEX15Q9BXT5 2789 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 MID1O15344 667 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 SIN3BO75182 1162 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 LATS1O95835 1130 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 ZBED1O96006 694 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 ACP1P24666 158 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 TKTL1P51854 596 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 RHDQ02161 417 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 SFSWAPQ12872 951 aaKnown RBP11.83□□□□□ -0.52
BRCA1-213ENST00000476777 STK38Q15208 465 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 CST6Q15828 149 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 HNRNPA1L2Q32P51 320 aaKnown RBP11.83□□□□□ -0.52
BRCA1-213ENST00000476777 PROX2Q3B8N5 592 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 PKDCCQ504Y2 493 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 ZNF394Q53GI3 561 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms