RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ARID5BQ14865 1188 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 HSF5Q4G112 596 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PDPK2PQ6A1A2 396 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CCDC137Q6PK04 289 aaKnown RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 SHC4Q6S5L8 630 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 AFTPHQ6ULP2 937 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 MAMDC4Q6UXC1 1216 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 AGMOQ6ZNB7 445 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 TRIM69Q86WT6 500 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PHYKPLQ8IUZ5 450 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 GPR65Q8IYL9 337 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 RNF217Q8TC41 542 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 FAM172AQ8WUF8 416 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 SLC22A18Q96BI1 424 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CPB2Q96IY4 423 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ELMO2Q96JJ3 720 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 RUSC1Q9BVN2 902 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 RASSF4Q9H2L5 321 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ACTR5Q9H9F9 607 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF556Q9HAH1 456 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 DUS2Q9NX74 493 aaKnown RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PSMC3IPQ9P2W1 217 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PCDHGB3Q9Y5G1 929 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 MAFBQ9Y5Q3 323 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 IRS2Q9Y4H2 1338 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PHRF1Q9P1Y6 1649 aaKnown RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 SPEF2Q9C093 1822 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CBX4O00257 560 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CDH16O75309 829 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ANXA6P08133 673 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 RBP3P10745 1247 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 WARSP23381 471 aaKnown RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 GABRR2P28476 465 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 MLH1P40692 756 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CASP2P42575 452 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 MMP13P45452 471 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 TTPAP49638 278 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 NDST1P52848 882 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CASP6P55212 293 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 IRX1P78414 480 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 GABPB1Q06547 395 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 RARS2Q5T160 578 aaKnown RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PACS1Q6VY07 963 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CHPFQ8IZ52 775 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CDK20Q8IZL9 346 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 TAGAPQ8N103 731 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 TMCO5AQ8N6Q1 288 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 IPMKQ8NFU5 416 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PRCCQ92733 491 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 SPATA5L1Q9BVQ7 753 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 LHX5Q9H2C1 402 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 SUDS3Q9H7L9 328 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 EPB41L5Q9HCM4 733 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 C6orf203Q9P0P8 240 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 TSPAN16Q9UKR8 245 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CORO2BQ9UQ03 480 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PIK3C2AO00443 1686 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 TTLL8A6PVC2 850 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PER2O15055 1255 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ANGPT2O15123 496 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 LAMTOR5O43504 91 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 KCNJ13O60928 360 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF217O75362 1048 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 KLHL2O95198 593 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 FGF1P05230 155 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 WEE2P0C1S8 567 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 TPBGLP0DKB5 382 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ALADP13716 330 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ELNP15502 786 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 SLC8A1P32418 973 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 IFNGR2P38484 337 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CCNFP41002 786 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 TUBP50607 506 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ITGA8P53708 1063 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CDH4P55283 916 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF200P98182 395 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CAP1Q01518 475 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 BNC1Q01954 994 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 GHRHRQ02643 423 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PDIA2Q13087 525 aaKnown RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ZBTB17Q13105 803 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ATP13A5Q4VNC0 1218 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CERS6Q6ZMG9 384 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 SAPCD2Q86UD0 394 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 NATD1Q8N6N6 113 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 DUSP16Q9BY84 665 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CDT1Q9H211 546 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 MAGEH1Q9H213 219 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 CRTAC1Q9NQ79 661 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 C20orf96Q9NUD7 363 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-215ENST00000474539 AGPAT5Q9NUQ2 364 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ATAD3AQ9NVI7 634 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ARL15Q9NXU5 204 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 TAS2R13Q9NYV9 303 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 POLG2Q9UHN1 485 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 PTPRJQ12913 1337 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 H3BNH8 94 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 ADH1BP00325 375 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 FOSL2P15408 326 aa4.73□□□□□ -1.65
CCNL1-215ENST00000474539 IL10P22301 178 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms