RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 ZNF513Q8N8E2 541 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-214ENST00000473778 RILPQ96NA2 401 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 SHCBP1LQ9BZQ2 653 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 XPNPEP3Q9NQH7 507 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 THAP1Q9NVV9 213 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 SYBUQ9NX95 663 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 DLGAP2Q9P1A6 1054 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 LRCH1Q9Y2L9 728 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 NUP205Q92621 2012 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 PDCD11Q14690 1871 aaKnown RBP11.26□□□□□ -0.61
C9orf3-214ENST00000473778 A0A0A0MRY4 1105 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 ZNF487B1APH4 448 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 PLIN3O60664 434 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 COQ9O75208 318 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 GSTA2P09210 222 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 IGFBP6P24592 240 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-214ENST00000473778 GRM5P41594 1212 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 ACTR3P61158 418 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 MRPS35P82673 323 aaKnown RBP11.26□□□□□ -0.61
C9orf3-214ENST00000473778 PDE1BQ01064 536 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 LAMB3Q13751 1172 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 DPY19L2Q6NUT2 758 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 MARK2Q7KZI7 788 aaKnown RBP11.26□□□□□ -0.61
C9orf3-214ENST00000473778 TRIM74Q86UV6 250 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 TRIM73Q86UV7 250 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 C10orf107Q8IVU9 208 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 LMNTD2Q8IXW0 634 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 COLGALT1Q8NBJ5 622 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 GSTCDQ8NEC7 633 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 IFT43Q96FT9 208 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 SPATA13Q96N96 652 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 GORASP1Q9BQQ3 440 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 NXF3Q9H4D5 531 aaKnown RBP11.26□□□□□ -0.61
C9orf3-214ENST00000473778 GOLGA2P5Q9HBQ8 144 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 PNPOQ9NVS9 261 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 TMEM216Q9P0N5 145 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 TSC2P49815 1807 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 A8MXQ7 604 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 ZNF195O14628 629 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 BEST1O76090 585 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 DDNO94850 711 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 ERVK-10P10266 1014 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 CYP2C8P10632 490 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 ANPEPP15144 967 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 AKAP5P24588 427 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 PSMB4P28070 264 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 BAG6P46379 1132 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 NR2C2P49116 596 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 RABGGTBP53611 331 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 WASHC5Q12768 1159 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 ARCQ7LC44 396 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 CMC1Q7Z7K0 106 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 MYLK4Q86YV6 388 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 TRIM42Q8IWZ5 723 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 GPC2Q8N158 579 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 RNF169Q8NCN4 708 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 PIWIL2Q8TC59 973 aaKnown RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 TFB1MQ8WVM0 346 aaKnown RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 STMN2Q93045 179 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 MOCOSQ96EN8 888 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 P2RY11Q96G91 374 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 SNX27Q96L92 541 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 FCRL3Q96P31 734 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 TSC22D3Q99576 134 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 PAPOLBQ9NRJ5 636 aaKnown RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 SYNJ2BP-COX16A0A087WUM0 186 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 H3BRB1 525 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 I6L893 689 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 RNF103O00237 685 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 USP12O75317 370 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 PYGLP06737 847 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 ITGA2BP08514 1039 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 AOC1P19801 751 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 MLH1P40692 756 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 ABCG1P45844 678 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 SLC1A6P48664 564 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 RPL34P49207 117 aaKnown RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 ROR2Q01974 943 aaKnown RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 C9orf57Q5W0N0 161 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 ARHGAP17Q68EM7 881 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 CYS1Q717R9 158 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 RSPH3Q86UC2 560 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 PLD6Q8N2A8 252 aaKnown RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 RAB3IL1Q8TBN0 382 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 SLC2A14Q8TDB8 520 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 APBB2Q92870 758 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 GATA6Q92908 595 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 AZIN2Q96A70 460 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 DDX50Q9BQ39 737 aaKnown RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 TUT1Q9H6E5 874 aaKnown RBP11.25□□□□□ -0.61
C9orf3-214ENST00000473778 ANLNQ9NQW6 1124 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 COX16Q9P0S2 106 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 ZNF212Q9UDV6 495 aa11.25□□□□□ -0.61
C9orf3-214ENST00000473778 SHROOM3Q8TF72 1996 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 F8W8V4 182 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 SPECC1L-ADORA2AF8WAN1 911 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 SIN3BO75182 1162 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 SETSIPP0DME0 302 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 GNAT1P11488 350 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 SERPINB9P50453 376 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms