RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	ATP5C1	P36542	298 aa	Known RBP	12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	ID4	P47928	161 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	SLC6A11	P48066	632 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	PSEN1	P49768	467 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	SRSF5	Q13243	272 aa	Known RBP	12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	RPS6KA1	Q15418	735 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	WHAMMP3	Q1A5X7	153 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	RAB41	Q5JT25	222 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	LY6G5C	Q5SRR4	150 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	BEND5	Q7L4P6	421 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	SLC26A9	Q7LBE3	791 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	SCD5	Q86SK9	330 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	NT5DC3	Q86UY8	548 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	PIGZ	Q86VD9	579 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	BBS7	Q8IWZ6	715 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	USP33	Q8TEY7	942 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	WBP2	Q969T9	261 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	ACD	Q96AP0	544 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	HES6	Q96HZ4	224 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	PNKP	Q96T60	521 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	NACA2	Q9H009	215 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	L2HGDH	Q9H9P8	463 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	RRN3	Q9NYV6	651 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	CYTH4	Q9UIA0	394 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	CDC23	Q9UJX2	597 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	GMEB2	Q9UKD1	530 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	SNX12	Q9UMY4	172 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663	ALG6	Q9Y672	507 aa		12.53	□□□□□ -0.4
CTNS-205	ENST00000467663		A0A1W2PQH9	124 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	HOXC11	O43248	304 aa	Predicted RBP	12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	RNF8	O76064	485 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	URI1	O94763	535 aa	Predicted RBP	12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	RET	P07949	1114 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	ADH5	P11766	374 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	RARG	P13631	454 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	CTNNA2	P26232	953 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	PXN	P49023	591 aa	Predicted RBP	12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	GAD2	Q05329	585 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	CKAP4	Q07065	602 aa	Known RBP	12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	DMC1	Q14565	340 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	MESD	Q14696	234 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	LPAL2	Q16609	132 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	LRRC38	Q5VT99	294 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	OR6B2	Q6IFH4	312 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	OLFML1	Q6UWY5	402 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	PRR23B	Q6ZRT6	265 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	C12orf40	Q86WS4	652 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	SIX6OS1	Q8N1H7	587 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	TLR10	Q9BXR5	811 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	SPHK2	Q9NRA0	654 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	POLR3B	Q9NW08	1133 aa	Predicted RBP	12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	CLIC5	Q9NZA1	410 aa		12.52	□□□□□ -0.41
CTNS-205	ENST00000467663	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	PSTPIP1	O43586	416 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	SPOP	O43791	374 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	HSF2BP	O75031	334 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	LRP3	O75074	770 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	KAT7	O95251	611 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	IRF1	P10914	325 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	CHRM1	P11229	460 aa	Predicted RBP	12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	GRIA2	P42262	883 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	ZNF143	P52747	638 aa	Predicted RBP	12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	MRPS21	P82921	87 aa	Known RBP	12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	MESP2	Q0VG99	397 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	HADH	Q16836	314 aa	Known RBP	12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	FAM102A	Q5T9C2	384 aa	Predicted RBP	12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	PM20D1	Q6GTS8	502 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	CEP68	Q76N32	757 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	TADA2B	Q86TJ2	420 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	DNAAF5	Q86Y56	855 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	ETFBKMT	Q8IXQ9	262 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	PHTF2	Q8N3S3	785 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	CEP112	Q8N8E3	955 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	MNS1	Q8NEH6	495 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	GAB3	Q8WWW8	586 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	GOLGA1	Q92805	767 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	RMDN1	Q96DB5	314 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	HHIP	Q96QV1	700 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	CDK5RAP1	Q96SZ6	601 aa	Known RBP	12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	NAP1L3	Q99457	506 aa	Predicted RBP	12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	CNPY3	Q9BT09	278 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	CARD9	Q9H257	536 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	PARD6A	Q9NPB6	346 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	EBF1	Q9UH73	591 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	DNMT3L	Q9UJW3	386 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	TMEM59L	Q9UK28	342 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	MRFAP1	Q9Y605	127 aa		12.51	□□□□□ -0.41
CTNS-205	ENST00000467663	SPTBN4	Q9H254	2564 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	ANTXRL	A6NF34	631 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	AXIN1	O15169	862 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	PAPSS1	O43252	624 aa	Predicted RBP	12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	ATMIN	O43313	823 aa	Predicted RBP	12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	RPP40	O75818	363 aa	Known RBP	12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	APBB3	O95704	486 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	ATP1A1	P05023	1023 aa	Known RBP	12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	APOD	P05090	189 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	RALA	P11233	206 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	GPD1	P21695	349 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	COMT	P21964	271 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms