RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 MAGEC1O60732 1142 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 CCNDBP1O95273 360 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 HMGCRP04035 888 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 CCDC166P0CW27 439 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 DGKAP23743 735 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 FKBP1AP62942 108 aaKnown RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 PPIDQ08752 370 aaKnown RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 RNF180Q86T96 592 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 PPP1R16AQ96I34 528 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 FAIM2Q9BWQ8 316 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 TLR8Q9NR97 1041 aaKnown RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 UPB1Q9UBR1 384 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 CD163L1Q9NR16 1453 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 TRIM66O15016 1216 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ATG7O95352 703 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ASMTLO95671 621 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 RPL5P46777 297 aaKnown RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 CASP4P49662 377 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 NEK3P51956 506 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 PRKCEQ02156 737 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 DDR1Q08345 913 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SF3A3Q12874 501 aaKnown RBP eCLIP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 CDH18Q13634 790 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 PTPROQ16827 1216 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 GPALPP1Q8IXQ4 340 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 C4orf19Q8IY42 314 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 OR7A2PQ8NGA2 310 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 IGDCC4Q8TDY8 1250 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SH3RF3Q8TEJ3 882 aaPredicted RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 TMEM117Q9H0C3 514 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 REEP1Q9H902 201 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SLC24A3Q9HC58 644 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SPAG4Q9NPE6 437 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 HPS4Q9NQG7 708 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 PNPLA3Q9NST1 481 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 VANGL2Q9ULK5 521 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZNF510Q9Y2H8 683 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 PDE2AO00408 941 aaPredicted RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ITGA10O75578 1167 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 EPN2O95208 641 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 COL6A2P12110 1019 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ADORA2BP29275 332 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 GRIK3Q13003 919 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 TUBA3CQ13748 450 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SQLEQ14534 574 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZRANB3Q5FWF4 1079 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 TBCELQ5QJ74 424 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ERICH5Q6P6B1 374 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 PPP3R2Q96LZ3 170 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 RNF145Q96MT1 663 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZFYVE28Q9HCC9 887 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 KBTBD4Q9NVX7 518 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 CDH9Q9ULB4 789 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 USP18Q9UMW8 372 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SCAF8Q9UPN6 1271 aaKnown RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 CPS1P31327 1500 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 VIRMAQ69YN4 1812 aaKnown RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 HAT1O14929 419 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 FARP2O94887 1054 aaPredicted RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 DHFRP00374 187 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 LCP1P13796 627 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ATP6V1C1P21283 382 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 YWHAQP27348 245 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 RXRBP28702 533 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ADSSP30520 456 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 HOXA13P31271 388 aaPredicted RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 PKN1Q16512 942 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SWT1Q5T5J6 900 aaKnown RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ANXA8L1Q5VT79 327 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 STAG3L4Q8TBR4 150 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SLC16A10Q8TF71 515 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 EEF1AKMT1Q8WVE0 214 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 RFT1Q96AA3 541 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 MIEF2Q96C03 454 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 CLCC1Q96S66 551 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 CGRRF1Q99675 332 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 FICDQ9BVA6 458 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 KIFC1Q9BW19 673 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 DPY30Q9C005 99 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 FHDC1Q9C0D6 1143 aaPredicted RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SIK2Q9H0K1 926 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 HDHD2Q9H0R4 259 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ANKHQ9HCJ1 492 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 GALNT8Q9NY28 637 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SAE1Q9UBE0 346 aaPredicted RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 RUVBL2Q9Y230 463 aaKnown RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ERGIC3Q9Y282 383 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 C15orf41Q9Y2V0 281 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 PCDHB7Q9Y5E2 793 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 NPHP3-ACAD11A0A0J9YXS1 232 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 A0A0X1KG70 313 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 SLC28A1O00337 649 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 HLA-DRAP01903 254 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 LRG1P02750 347 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 TSPAN19P0C672 248 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 TXNP10599 105 aaKnown RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 TLX1P31314 330 aaPredicted RBP4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 PTPN7P35236 360 aa4.11□□□□□ -1.75
PPP1R9A-208ENST00000456331 LRRC36Q1X8D7 754 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms