RNA–Protein interactions for RNA: ENST00000436436.5

R3HDM1-207, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-207ENST00000436436 CPA4Q9UI42 421 aa3.11□□□□□ -1.91
R3HDM1-207ENST00000436436 TRIM17Q9Y577 477 aa3.11□□□□□ -1.91
R3HDM1-207ENST00000436436 ITGB4P16144 1822 aa3.11□□□□□ -1.91
R3HDM1-207ENST00000436436 CENPJQ9HC77 1338 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-207ENST00000436436 LTN1O94822 1766 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 DLEC1Q9Y238 1755 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 AFDNP55196 1824 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 SLX4Q8IY92 1834 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 HMGB1P1B2RPK0 211 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 FOXN3O00409 490 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 PARNO95453 639 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 MAP4K4O95819 1239 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 TGFB3P10600 412 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 CYP19A1P11511 503 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 CDKN2AP42771 156 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 TM4SF4P48230 202 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 MTHFSP49914 203 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 CFHR3Q02985 330 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 KCNB1Q14721 858 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 PRR5LQ6MZQ0 368 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 C18orf65Q6ZTR6 163 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 MMP21Q8N119 569 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 ZNF548Q8NEK5 533 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 MAFAQ8NHW3 353 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 HPS3Q969F9 1004 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 HIC2Q96JB3 615 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 CGRRF1Q99675 332 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 VN1R3Q9BXE9 311 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 TRIM54Q9BYV2 358 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 DPH1Q9BZG8 443 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 TRIM5Q9C035 493 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 MS4A7Q9GZW8 240 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 XPNPEP3Q9NQH7 507 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 MGAT4CQ9UBM8 478 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 STAP2Q9UGK3 403 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 SOS1Q07889 1333 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 EVC2Q86UK5 1308 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 NRXN2Q9P2S2 1712 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 RGPD2P0DJD1 1756 aa3.1□□□□□ -1.91
R3HDM1-207ENST00000436436 AKAP11Q9UKA4 1901 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 ZFHX4Q86UP3 3567 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 NCOR1O75376 2440 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 KAT6AQ92794 2004 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 PKD1L2Q7Z442 2459 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 COL4A5P29400 1685 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 ERVV-2B6SEH9 535 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 USP12O75317 370 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 ALDH2P05091 517 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 CD63P08962 238 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 CREB1P16220 341 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 ATF7P17544 494 aaPredicted RBP3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 TIRAPP58753 221 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 RAB1AP62820 205 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 AMPD3Q01432 767 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 RAB32Q13637 225 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 RRS1Q15050 365 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 SEC23BQ15437 767 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 INSCQ1MX18 579 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 SLC4A8Q2Y0W8 1093 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 ZNF750Q32MQ0 723 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 TBC1D9BQ66K14 1250 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 SMC5Q8IY18 1101 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 CELF5Q8N6W0 485 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 OR6B3Q8NGW1 331 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 PLBD2Q8NHP8 589 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 TMEM171Q8WVE6 324 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 CHMP4CQ96CF2 233 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 ZNF333Q96JL9 665 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 GUCD1Q96NT3 240 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 P2RX7Q99572 595 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 SMAD5Q99717 465 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 ARMT1Q9H993 441 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 CHPF2Q9P2E5 772 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 LUC7L2Q9Y383 392 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 COL4A3BPQ9Y5P4 624 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 CFAP54Q96N23 3096 aa3.09□□□□□ -1.91
R3HDM1-207ENST00000436436 USP34Q70CQ2 3546 aa3.09□□□□□ -1.92
R3HDM1-207ENST00000436436 CHD8Q9HCK8 2581 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 WDFY4Q6ZS81 3184 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 XIRP2A4UGR9 3374 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 MUC6Q6W4X9 2439 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 CACNA1SQ13698 1873 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 IGLV5-39A0A0G2JS06 123 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 CCDC194A0A1B0GVG4 234 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 BTN3A1O00481 513 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 SPRY2O43597 315 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 PEX14O75381 377 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 OFD1O75665 1012 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 TACR3P29371 465 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 UQCRC1P31930 480 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 GMPSP49915 693 aaPredicted RBP3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 B4GALNT1Q00973 533 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 TIAL1Q01085 375 aaKnown RBP eCLIP3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 CXCL9Q07325 125 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 HYAL1Q12794 435 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 CTBP1Q13363 440 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 MTX1Q13505 466 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 STIM1Q13586 685 aa3.08□□□□□ -1.92
R3HDM1-207ENST00000436436 FAM110CQ1W6H9 321 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms