RNA–Protein interactions for RNA: ENST00000436436.5

R3HDM1-207, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-207ENST00000436436 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
R3HDM1-207ENST00000436436 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
R3HDM1-207ENST00000436436 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
R3HDM1-207ENST00000436436 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
R3HDM1-207ENST00000436436 FOXD1Q16676 465 aa15.27■□□□□ 0.04
R3HDM1-207ENST00000436436 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
R3HDM1-207ENST00000436436 MSH5O43196 834 aa14.36□□□□□ -0.11
R3HDM1-207ENST00000436436 PIAS4Q8N2W9 510 aaPredicted RBP14.31□□□□□ -0.12
R3HDM1-207ENST00000436436 PPP6R1Q9UPN7 881 aa14.29□□□□□ -0.12
R3HDM1-207ENST00000436436 ADRA2BP18089 450 aa14.25□□□□□ -0.13
R3HDM1-207ENST00000436436 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
R3HDM1-207ENST00000436436 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
R3HDM1-207ENST00000436436 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
R3HDM1-207ENST00000436436 MAPK8IP2Q13387 824 aaPredicted RBP13.05□□□□□ -0.32
R3HDM1-207ENST00000436436 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
R3HDM1-207ENST00000436436 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
R3HDM1-207ENST00000436436 HOXD11P31277 338 aaPredicted RBP12.61□□□□□ -0.39
R3HDM1-207ENST00000436436 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
R3HDM1-207ENST00000436436 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
R3HDM1-207ENST00000436436 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
R3HDM1-207ENST00000436436 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
R3HDM1-207ENST00000436436 CACNB1Q02641 598 aaPredicted RBP12.24□□□□□ -0.45
R3HDM1-207ENST00000436436 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
R3HDM1-207ENST00000436436 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
R3HDM1-207ENST00000436436 C1QBPQ07021 282 aaKnown RBP12.09□□□□□ -0.47
R3HDM1-207ENST00000436436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.496e-8■■■□□ 17.7
R3HDM1-207ENST00000436436 KCNA4P22459 653 aa11.99□□□□□ -0.49
R3HDM1-207ENST00000436436 U3KPZ7 1027 aaPredicted RBP11.71□□□□□ -0.53
R3HDM1-207ENST00000436436 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
R3HDM1-207ENST00000436436 APLP2Q06481 763 aa11.53□□□□□ -0.56
R3HDM1-207ENST00000436436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.52□□□□□ -0.57
R3HDM1-207ENST00000436436 HNRNPUL2Q1KMD3 747 aaKnown RBP11.52□□□□□ -0.57
R3HDM1-207ENST00000436436 CAPN15O75808 1086 aa11.51□□□□□ -0.57
R3HDM1-207ENST00000436436 SPINK5Q9NQ38 1064 aaPredicted RBP11.49□□□□□ -0.57
R3HDM1-207ENST00000436436 DSG3P32926 999 aa11.44□□□□□ -0.58
R3HDM1-207ENST00000436436 SAMD1Q6SPF0 538 aaPredicted RBP11.43□□□□□ -0.58
R3HDM1-207ENST00000436436 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
R3HDM1-207ENST00000436436 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
R3HDM1-207ENST00000436436 MYCNP04198 464 aaPredicted RBP11.34□□□□□ -0.59
R3HDM1-207ENST00000436436 TRHP20396 242 aaPredicted RBP11.33□□□□□ -0.6
R3HDM1-207ENST00000436436 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
R3HDM1-207ENST00000436436 ABCB7O75027 752 aa11.21□□□□□ -0.61
R3HDM1-207ENST00000436436 POLA2Q14181 598 aa11.05□□□□□ -0.64
R3HDM1-207ENST00000436436 ZBTB22O15209 634 aa11.01□□□□□ -0.65
R3HDM1-207ENST00000436436 RBM42Q9BTD8 480 aaKnown RBP11□□□□□ -0.65
R3HDM1-207ENST00000436436 ATF5Q9Y2D1 282 aaPredicted RBP10.97□□□□□ -0.65
R3HDM1-207ENST00000436436 ATXN8OSP0DMR3 200 aa10.95□□□□□ -0.66
R3HDM1-207ENST00000436436 ZBTB12Q9Y330 459 aaPredicted RBP10.94□□□□□ -0.66
R3HDM1-207ENST00000436436 POTEHQ6S545 545 aa10.87□□□□□ -0.67
R3HDM1-207ENST00000436436 AKT1S1Q96B36 256 aa10.73□□□□□ -0.69
R3HDM1-207ENST00000436436 OSCARQ8IYS5 282 aa10.68□□□□□ -0.7
R3HDM1-207ENST00000436436 CHRDL2Q6WN34 429 aa10.67□□□□□ -0.7
R3HDM1-207ENST00000436436 FBLN2P98095 1184 aa10.65□□□□□ -0.7
R3HDM1-207ENST00000436436 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
R3HDM1-207ENST00000436436 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
R3HDM1-207ENST00000436436 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
R3HDM1-207ENST00000436436 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
R3HDM1-207ENST00000436436 CSRNP3Q8WYN3 585 aa10.57□□□□□ -0.72
R3HDM1-207ENST00000436436 MKRN4PQ13434 485 aaPredicted RBP10.49□□□□□ -0.73
R3HDM1-207ENST00000436436 PITPNM1O00562 1244 aa10.45□□□□□ -0.74
R3HDM1-207ENST00000436436 EHMT2Q96KQ7 1210 aa10.43□□□□□ -0.74
R3HDM1-207ENST00000436436 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
R3HDM1-207ENST00000436436 PIP4P2Q8N4L2 257 aa10.41□□□□□ -0.74
R3HDM1-207ENST00000436436 ZNF692Q9BU19 519 aaPredicted RBP10.4□□□□□ -0.74
R3HDM1-207ENST00000436436 FXR2P51116 673 aaKnown RBP eCLIP10.38□□□□□ -0.75
R3HDM1-207ENST00000436436 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
R3HDM1-207ENST00000436436 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
R3HDM1-207ENST00000436436 PABPN1Q86U42 306 aaKnown RBP eCLIP10.24□□□□□ -0.77
R3HDM1-207ENST00000436436 SP7Q8TDD2 431 aaPredicted RBP10.23□□□□□ -0.77
R3HDM1-207ENST00000436436 HAX1O00165 279 aa10.21□□□□□ -0.77
R3HDM1-207ENST00000436436 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
R3HDM1-207ENST00000436436 PRR29P0C7W0 189 aa10.15□□□□□ -0.78
R3HDM1-207ENST00000436436 SPDYE4A6NLX3 237 aa10.07□□□□□ -0.8
R3HDM1-207ENST00000436436 STAG3Q9UJ98 1225 aa10.06□□□□□ -0.8
R3HDM1-207ENST00000436436 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
R3HDM1-207ENST00000436436 CHADLQ6NUI6 762 aa10.04□□□□□ -0.8
R3HDM1-207ENST00000436436 EVX2Q03828 476 aa10.02□□□□□ -0.81
R3HDM1-207ENST00000436436 FARP1Q9Y4F1 1045 aaPredicted RBP9.96□□□□□ -0.82
R3HDM1-207ENST00000436436 CREBZFQ9NS37 354 aa9.89□□□□□ -0.83
R3HDM1-207ENST00000436436 CD44P16070 742 aaKnown RBP9.88□□□□□ -0.83
R3HDM1-207ENST00000436436 CLCN6P51797 869 aa9.87□□□□□ -0.83
R3HDM1-207ENST00000436436 GABBR2O75899 941 aa9.86□□□□□ -0.83
R3HDM1-207ENST00000436436 PROM2Q8N271 834 aa9.86□□□□□ -0.83
R3HDM1-207ENST00000436436 NPM1P06748 294 aaKnown RBP eCLIP9.78□□□□□ -0.84
R3HDM1-207ENST00000436436 ZNF579Q8NAF0 562 aaKnown RBP9.76□□□□□ -0.85
R3HDM1-207ENST00000436436 PAK3O75914 559 aaPredicted RBP9.74□□□□□ -0.85
R3HDM1-207ENST00000436436 ZRANB1Q9UGI0 708 aa9.74□□□□□ -0.85
R3HDM1-207ENST00000436436 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
R3HDM1-207ENST00000436436 PLEKHG5O94827 1062 aa9.66□□□□□ -0.86
R3HDM1-207ENST00000436436 DCBLD2Q96PD2 775 aa9.64□□□□□ -0.87
R3HDM1-207ENST00000436436 POTEIP0CG38 1075 aa9.62□□□□□ -0.87
R3HDM1-207ENST00000436436 MIER1Q8N108 512 aa9.6□□□□□ -0.87
R3HDM1-207ENST00000436436 FKBP8Q14318 412 aa9.59□□□□□ -0.87
R3HDM1-207ENST00000436436 LHX8Q68G74 356 aa9.59□□□□□ -0.87
R3HDM1-207ENST00000436436 PHF12Q96QT6 1004 aa9.58□□□□□ -0.88
R3HDM1-207ENST00000436436 GALR2O43603 387 aaPredicted RBP9.57□□□□□ -0.88
R3HDM1-207ENST00000436436 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
R3HDM1-207ENST00000436436 ZBTB47Q9UFB7 747 aaPredicted RBP9.54□□□□□ -0.88
R3HDM1-207ENST00000436436 TSPYL2Q9H2G4 693 aaPredicted RBP9.52□□□□□ -0.89
R3HDM1-207ENST00000436436 CCDC61Q9Y6R9 512 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms