RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SEC24AO95486 1093 aa12.62□□□□□ -0.39
CLCN4-203ENST00000421085 ABCB1P08183 1280 aaPredicted RBP12.62□□□□□ -0.39
CLCN4-203ENST00000421085 ARP10275 920 aa12.62□□□□□ -0.39
CLCN4-203ENST00000421085 RPL14P50914 215 aaKnown RBP12.62□□□□□ -0.39
CLCN4-203ENST00000421085 LSM3P62310 102 aaKnown RBP12.62□□□□□ -0.39
CLCN4-203ENST00000421085 NOTUMQ6P988 496 aa12.62□□□□□ -0.39
CLCN4-203ENST00000421085 DNAJC14Q6Y2X3 702 aaPredicted RBP12.62□□□□□ -0.39
CLCN4-203ENST00000421085 MSL3Q8N5Y2 521 aaKnown RBP12.62□□□□□ -0.39
CLCN4-203ENST00000421085 BPIFB6Q8NFQ5 453 aa12.62□□□□□ -0.39
CLCN4-203ENST00000421085 PSMA8Q8TAA3 256 aa12.62□□□□□ -0.39
CLCN4-203ENST00000421085 SCUBE2Q9NQ36 999 aa12.62□□□□□ -0.39
CLCN4-203ENST00000421085 R3HDM2Q9Y2K5 976 aaKnown RBP12.62□□□□□ -0.39
CLCN4-203ENST00000421085 HBP1O60381 514 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 CCNT2O60583 730 aaKnown RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 PIGNO95427 931 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 FGFR2P21802 821 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 TCF7P36402 384 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 GRIA3P42263 894 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 HALP42357 657 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 ITGA1P56199 1179 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 BROXQ5VW32 411 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 NDNQ99608 321 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 ACTR8Q9H981 624 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 A1CFQ9NQ94 594 aaKnown RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 TRDMT1O14717 391 aaKnown RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 TPP1O14773 563 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 LIN7AO14910 233 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 CDH3P22223 829 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 NPY2RP49146 381 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 MTTPP55157 894 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 UBAP2LQ14157 1087 aaKnown RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 GPR107Q5VW38 600 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 MOXD1Q6UVY6 613 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 ZBTB46Q86UZ6 589 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 PIWIL2Q8TC59 973 aaKnown RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 TMEM165Q9HC07 324 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 TNS3Q68CZ2 1445 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 CRTAMO95727 393 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 TSPAN19P0C672 248 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 SLC2A3P11169 496 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 QPCTQ16769 361 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 FBXO33Q7Z6M2 555 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 ZNF34Q8IZ26 560 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 EPB41L1Q9H4G0 881 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 NT5MQ9NPB1 228 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 SORCS3Q9UPU3 1222 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 TMEM114B3SHH9 223 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 DYNC1LI2O43237 492 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 CBFA2T3O75081 653 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 LTFP02788 710 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 COX4I1P13073 169 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 SFSWAPQ12872 951 aaKnown RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 GRIK3Q13003 919 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 ZIK1Q3SY52 487 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 ABRAXAS1Q6UWZ7 409 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 C3orf67Q6ZVT6 689 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 NACC2Q96BF6 587 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 CAMKK2Q96RR4 588 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 APBA2Q99767 749 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 TSEN34Q9BSV6 310 aaKnown RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 MTG1Q9BT17 334 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 ABI2Q9NYB9 513 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 ERAP1Q9NZ08 941 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 TET3O43151 1660 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 H3BN98 237 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 F9P00740 461 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 MYL12AP19105 171 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 NAMPTP43490 491 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 PLK1P53350 603 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 ERAP2Q6P179 960 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 FBXO39Q8N4B4 442 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 CENPIQ92674 756 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-203ENST00000421085 TBCDQ9BTW9 1192 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 PDGFCQ9NRA1 345 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 PIM2Q9P1W9 311 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 SNX8Q9Y5X2 465 aa12.61□□□□□ -0.39
CLCN4-203ENST00000421085 AFF2P51816 1311 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 TSPAN9O75954 239 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 BCAT1P54687 386 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 SRP54P61011 504 aaKnown RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 ZNF177Q13360 481 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 TOP3AQ13472 1001 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 DPYSL3Q14195 570 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 ZNF284Q2VY69 593 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 ACTRT2Q8TDY3 377 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 HTR3CQ8WXA8 447 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 BHMTQ93088 406 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 NFKBIL1Q9UBC1 381 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 UBQLN1Q9UMX0 589 aaKnown RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 SYNCRIPO60506 623 aaKnown RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 MSH3P20585 1137 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 DSG3P32926 999 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 CDH17Q12864 832 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 MAD2L1Q13257 205 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 NFIXQ14938 502 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 PDK4Q16654 411 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 MPZL3Q6UWV2 235 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms