RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 DONSONQ9NYP3 566 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 LPAR3Q9UBY5 353 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 KNSTRNQ9Y448 316 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 MORC2Q9Y6X9 1032 aaPredicted RBP3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 LRRC9Q6ZRR7 1453 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 A0A087WZ62 844 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 CCDC194A0A1B0GVG4 234 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM234BA2RU67 622 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 CTIFO43310 598 aaKnown RBP3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 USP12O75317 370 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 REC8O95072 547 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 NDST3O95803 873 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 GLP2RO95838 553 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 ARP10275 920 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 CAPN2P17655 700 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 DRD1P21728 446 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 CASQ1P31415 396 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 HSPA7P48741 367 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 MAP2K1Q02750 393 aaPredicted RBP3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 TRDNQ13061 729 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 SEMA3BQ13214 749 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 BFSP2Q13515 415 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 CBFBQ13951 182 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 STARD3Q14849 445 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 MFSD13AQ14CX5 517 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 PFKFB3Q16875 520 aaPredicted RBP3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 TRIM71Q2Q1W2 868 aaKnown RBP3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 P3H1Q32P28 736 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 TEX35Q5T0J7 233 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 C10orf25Q5T742 122 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 MEX3CQ5U5Q3 659 aaKnown RBP3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 ANO7Q6IWH7 933 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 DLK2Q6UY11 383 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 ZNF813Q6ZN06 617 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 KIAA0408Q6ZU52 694 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 CERS3Q8IU89 383 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM184AQ8NB25 1140 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 MUL1Q969V5 352 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 THOC3Q96J01 351 aaKnown RBP3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 SGCZQ96LD1 299 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 WDR24Q96S15 920 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 RNF26Q9BY78 433 aaPredicted RBP3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 MED4Q9NPJ6 270 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 RXFP3Q9NSD7 469 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 GJB4Q9NTQ9 266 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 FZD4Q9ULV1 537 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 LRCH1Q9Y2L9 728 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 PCDHGB2Q9Y5G2 931 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 DDX49Q9Y6V7 483 aaKnown RBP3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 PRDM2Q13029 1718 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 POLA1P09884 1462 aaPredicted RBP3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 PRXQ9BXM0 1461 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 ARHGAP35Q9NRY4 1499 aa3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 BLMP54132 1417 aaPredicted RBP3.77□□□□□ -1.81
SDCBPP3-201ENST00000419629 PLEKHH1Q9ULM0 1364 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 FER1L4A9Z1Z3 1794 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 SPATA31A1Q5TZJ5 1347 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 LOC102724159A0A0B4J2E5 919 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 A0A1B0GUL7 405 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 TCRBV5S1A1TA0A578 114 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 OR2W5A6NFC9 320 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 CD8B2A6NJW9 211 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 CLIC1O00299 241 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 HTATSF1O43719 755 aaKnown RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 DHX16O60231 1041 aaKnown RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 ZNF853P0CG23 659 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 MATN1P21941 496 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 U2AF2P26368 475 aaKnown RBP eCLIP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 DDIT3P35638 169 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 TDO2P48775 406 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 THBS3P49746 956 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 JAK3P52333 1124 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 NANOS2P60321 138 aaKnown RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 GPC5P78333 572 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 ZNF91Q05481 1191 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 MTAPQ13126 283 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 GPS2Q13227 327 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 OS9Q13438 667 aaPredicted RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 DNASE1L3Q13609 305 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 UBE4AQ14139 1066 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 CSHL1Q14406 222 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 KCNJ12Q14500 433 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 PWP2Q15269 919 aaKnown RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 ZKSCAN8Q15776 578 aaPredicted RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 MPEG1Q2M385 716 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 LEXMQ3ZCV2 418 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 AASDHQ4L235 1098 aaPredicted RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 ARHGAP15Q53QZ3 475 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 RAP1GAP2Q684P5 730 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 CAVIN1Q6NZI2 390 aaKnown RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 LVRNQ6Q4G3 990 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 CASC1Q6TDU7 716 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 RANBP10Q6VN20 620 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 PIM3Q86V86 326 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 NBPF5PQ86XG9 351 aaPredicted RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 CLASRPQ8N2M8 674 aaKnown RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 GLIS1Q8NBF1 620 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 OSR1Q8TAX0 266 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms