RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 C16orf46Q6P387 395 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 RELTQ969Z4 430 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 PXDNLA1KZ92 1463 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 PXDNQ92626 1479 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 PIRTP0C851 137 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 ATP6AP1LQ52LC2 224 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 RASAL3Q86YV0 1011 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 TEX9Q8N6V9 391 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 PRKAG3Q9UGI9 489 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 KLHL2O95198 593 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 ACRP10323 421 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 TADA1Q96BN2 335 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 SERPINB11Q96P15 392 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 CYP39A1Q9NYL5 469 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 KRT8P05787 483 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 HSMCR30P0CW71 290 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 RENBPP51606 427 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.74■□□□□ 0.911e-7■■■■■ 36.1
CDC42BPB-201ENST00000361246 BTBD9Q96Q07 612 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 FERD3LQ96RJ6 166 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 CCT7Q99832 543 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 USP15Q9Y4E8 981 aaPredicted RBP20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 CAPN1P07384 714 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 ZNF23P17027 643 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 PTPN1P18031 435 aaKnown RBP20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 ROGDIQ9GZN7 287 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 LRRC4BQ9NT99 713 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 DNMT3LQ9UJW3 386 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 TCRBV5S4A2TA0A5A2 114 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 BTN3A1O00481 513 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 ARHGEF9O43307 516 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 HLA-DQA2P01906 255 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 TCEA1P23193 301 aaKnown RBP20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 CD86P42081 329 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 MPP3Q13368 585 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 TRIP10Q15642 601 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 TTC7BQ86TV6 843 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 ZNF410Q86VK4 478 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 FIG4Q92562 907 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 KAZALD1Q96I82 304 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 C1QTNF7Q9BXJ2 289 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 RIOX1Q9H6W3 641 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 ZNF606Q8WXB4 792 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 TRAF2Q12933 501 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 USP45Q70EL2 814 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 BRD9Q9H8M2 597 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 NRXN1Q9ULB1 1477 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 ELMO1Q92556 727 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 MYLPFQ96A32 169 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 DEPDC7Q96QD5 511 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 TMCC3Q9ULS5 477 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 VAPBO95292 243 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 CLK1P49759 484 aaKnown RBP20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 CCDC149Q6ZUS6 474 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 RIOX2Q8IUF8 465 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 TMEM245Q9H330 911 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 SCN3BQ9NY72 215 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 ATP6V1HQ9UI12 483 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 NRCAMQ92823 1304 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 SEC22BO75396 215 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 BGNP21810 368 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 ST13P5Q8NFI4 369 aaPredicted RBP20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 INTS13Q9NVM9 706 aa20.73■□□□□ 0.91
CDC42BPB-201ENST00000361246 RGS5O15539 181 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 CYP3A43Q9HB55 503 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 HMGCRP04035 888 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 MMP13P45452 471 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 ANXA11P50995 505 aaKnown RBP20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 NOA1Q8NC60 698 aaKnown RBP20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 SEC16BQ96JE7 1060 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBC1D3DA0A087WVF3 549 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBC1D3IA0A087WXS9 549 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBC1D3EA0A087X179 549 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBC1D3KA0A087X1G2 549 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBC1D3FA6NER0 549 aaPredicted RBP20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBC1D3LB9A6J9 549 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBC1D3HP0C7X1 549 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 SEMA3FQ13275 785 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBC1D3GQ6DHY5 549 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBC1D3CQ6IPX1 549 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBC1D3Q8IZP1 549 aaPredicted RBP20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 EPN3Q9H201 632 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 KCNMB4Q86W47 210 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 CXorf40BQ96DE9 158 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 ADAMTS13Q76LX8 1427 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 KRT16P08779 473 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 GALNT3Q14435 633 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 AP5B1Q2VPB7 878 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 BRSK2Q8IWQ3 736 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 SLC4A5Q9BY07 1137 aa20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 SPATS2LQ9NUQ6 558 aaKnown RBP20.72■□□□□ 0.91
CDC42BPB-201ENST00000361246 GLRA3O75311 464 aa20.71■□□□□ 0.91
CDC42BPB-201ENST00000361246 CRYMQ14894 314 aa20.71■□□□□ 0.91
CDC42BPB-201ENST00000361246 SCARA3Q6AZY7 606 aa20.71■□□□□ 0.91
CDC42BPB-201ENST00000361246 DLK2Q6UY11 383 aa20.71■□□□□ 0.91
CDC42BPB-201ENST00000361246 C4orf22Q6V702 233 aa20.71■□□□□ 0.91
CDC42BPB-201ENST00000361246 KRT33AO76009 404 aa20.71■□□□□ 0.91
CDC42BPB-201ENST00000361246 USP1O94782 785 aa20.71■□□□□ 0.91
CDC42BPB-201ENST00000361246 S100A5P33763 92 aa20.71■□□□□ 0.91
CDC42BPB-201ENST00000361246 SEC24CP53992 1094 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms