RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 ERCC2P18074 760 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 LHX1P48742 406 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 SERPINB9P50453 376 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 SCNN1GP51170 649 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 ZNF157P51786 506 aaPredicted RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 TMPRSS15P98073 1019 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 IFRD2Q12894 506 aaPredicted RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 OLIG2Q13516 323 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 PAFAH1B3Q15102 231 aaKnown RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 WDR6Q9NNW5 1121 aaKnown RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 FBXO6Q9NRD1 293 aaPredicted RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 NUP205Q92621 2012 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 SF3B1O75533 1304 aaKnown RBP eCLIP16.29■□□□□ 0.29e-6■■■■■ 68.9
PHTF1-201ENST00000357783 I3L4J1 428 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 TNPO2O14787 897 aaKnown RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 DLDP09622 509 aaKnown RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 AKR1A1P14550 325 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 EZRP15311 586 aaKnown RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 SERPINB3P29508 390 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 TPI1P60174 286 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 ZBTB16Q05516 673 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 CHI3L2Q15782 390 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 GDF6Q6KF10 455 aaPredicted RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 EDEM1Q92611 657 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 APBB2Q92870 758 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 PRR11Q96HE9 360 aaPredicted RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 PGLYRP2Q96PD5 576 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 PRDM16Q9HAZ2 1276 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 EIF2B3Q9NR50 452 aaKnown RBP16.29■□□□□ 0.2
PHTF1-201ENST00000357783 DDIT4Q9NX09 232 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 SYBUQ9NX95 663 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 IL1RAPL1Q9NZN1 696 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 SHROOM3Q8TF72 1996 aa16.29■□□□□ 0.2
PHTF1-201ENST00000357783 ARL5CA6NH57 179 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 CAPN15O75808 1086 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 TGDSO95455 350 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 IRX4P78413 519 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 BST1Q10588 318 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 CRYMQ14894 314 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 CTC1Q2NKJ3 1217 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 PARP6Q2NL67 630 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 PAN2Q504Q3 1202 aaKnown RBP16.28■□□□□ 0.2
PHTF1-201ENST00000357783 WLSQ5T9L3 541 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 CES4AQ5XG92 561 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 CES3Q6UWW8 571 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 C17orf99Q6UX52 265 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 PID1Q7Z2X4 250 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 RASAL3Q86YV0 1011 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 ARNTL2Q8WYA1 636 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 INPP5DQ92835 1189 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 TBC1D10AQ9BXI6 508 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 ZNF395Q9H8N7 513 aaPredicted RBP16.28■□□□□ 0.2
PHTF1-201ENST00000357783 MKS1Q9NXB0 559 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 KLHL8Q9P2G9 620 aaPredicted RBP16.28■□□□□ 0.2
PHTF1-201ENST00000357783 SNX10Q9Y5X0 201 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 FAM237BA0A1B0GVD1 139 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 KLF11O14901 512 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 HAUS5O94927 633 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 PGK1P00558 417 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 CHRNA1P02708 482 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 PGAM1P18669 254 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 EPHB2P29323 1055 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 NIPAL4Q0D2K0 466 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 LONP2Q86WA8 852 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 NUDCD3Q8IVD9 361 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 TMEM86AQ8N2M4 240 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 GPATCH11Q8N954 259 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 E2F7Q96AV8 911 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 AGAP3Q96P47 875 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 CNGB3Q9NQW8 809 aa16.28■□□□□ 0.2
PHTF1-201ENST00000357783 MTO1Q9Y2Z2 717 aaKnown RBP16.28■□□□□ 0.2
PHTF1-201ENST00000357783 ALDH1A2O94788 518 aa16.27■□□□□ 0.2
PHTF1-201ENST00000357783 LTFP02788 710 aa16.27■□□□□ 0.2
PHTF1-201ENST00000357783 FAM163BP0C2L3 166 aa16.27■□□□□ 0.2
PHTF1-201ENST00000357783 MYL2P10916 166 aa16.27■□□□□ 0.2
PHTF1-201ENST00000357783 MARK2Q7KZI7 788 aaKnown RBP16.27■□□□□ 0.2
PHTF1-201ENST00000357783 MTG1Q9BT17 334 aaPredicted RBP16.27■□□□□ 0.2
PHTF1-201ENST00000357783 PSAT1Q9Y617 370 aa16.27■□□□□ 0.2
PHTF1-201ENST00000357783 USP12O75317 370 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 CRHR1P34998 444 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 RASSF2P50749 326 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 PACS1Q6VY07 963 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 AGMOQ6ZNB7 445 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 RSPH3Q86UC2 560 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 NPWQ8N729 165 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 STKLD1Q8NE28 680 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 CDKL2Q92772 493 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 SKA1Q96BD8 255 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 SAR1AQ9NR31 198 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 ARL8BQ9NVJ2 186 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 FBXW11Q9UKB1 542 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 SCN10AQ9Y5Y9 1956 aa16.27■□□□□ 0.19
PHTF1-201ENST00000357783 DUSP11O75319 330 aaKnown RBP16.26■□□□□ 0.19
PHTF1-201ENST00000357783 PTPN3P26045 913 aa16.26■□□□□ 0.19
PHTF1-201ENST00000357783 ACCSLQ4AC99 568 aa16.26■□□□□ 0.19
PHTF1-201ENST00000357783 TIGD5Q53EQ6 642 aa16.26■□□□□ 0.19
PHTF1-201ENST00000357783 SPDYAQ5MJ70 313 aa16.26■□□□□ 0.19
PHTF1-201ENST00000357783 ATG16L1Q676U5 607 aa16.26■□□□□ 0.19
PHTF1-201ENST00000357783 TRIM42Q8IWZ5 723 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms