RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 RUVBL2Q9Y230 463 aaKnown RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 WFS1O76024 890 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 BCAT1P54687 386 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 ITGA9Q13797 1035 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 LBX2Q6XYB7 198 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 PPTC7Q8NI37 304 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 HELQQ8TDG4 1101 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 ZBTB18Q99592 522 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 APOL2Q9BQE5 337 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 CAAP1Q9H8G2 361 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 FBXO6Q9NRD1 293 aaPredicted RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 NDFIP2Q9NV92 336 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 SF3B1O75533 1304 aaKnown RBP eCLIP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 F9P00740 461 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 AKAP5P24588 427 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 GRK2P25098 689 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 NDST1P52848 882 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 PLOD1Q02809 727 aaPredicted RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 CYLC2Q14093 348 aaPredicted RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 LRRC38Q5VT99 294 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 ZPBP2Q6X784 338 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 PYDC1Q8WXC3 89 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 SLC45A1Q9Y2W3 748 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 CFAP99D6REC4 459 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 ALOX15BO15296 676 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 RTN3O95197 1032 aaPredicted RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 GJB1P08034 283 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 SLC1A5Q15758 541 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 PARP6Q2NL67 630 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 PABPC1LQ4VXU2 614 aaKnown RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 CCNJLQ8IV13 435 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 OR5B17Q8NGF7 314 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 JADE3Q92613 823 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 FOPNLQ96NB1 174 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 RPRD1AQ96P16 312 aaPredicted RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 SYT15Q9BQS2 421 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 LRMDAQ9H2I8 198 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 DDX43Q9NXZ2 648 aaKnown RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 HACD3Q9P035 362 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 STK39Q9UEW8 545 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 CICQ96RK0 1608 aaPredicted RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 A0A0B4J269 797 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 SERPINE1P05121 402 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 GFAPP14136 432 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 FASTKD3Q14CZ7 662 aaKnown RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 NOMO2Q5JPE7 1267 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 ALYREFQ86V81 257 aaKnown RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 MIB1Q86YT6 1006 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 C12orf50Q8NA57 414 aaPredicted RBP12.63□□□□□ -0.39
COLCA1-201ENST00000355430 FAM13CQ8NE31 585 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 SNX19Q92543 992 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 CCDC90BQ9GZT6 254 aa12.63□□□□□ -0.39
COLCA1-201ENST00000355430 PLIN4Q96Q06 1357 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 IGLV3-22A0A075B6J6 115 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 ATP6V1C1P21283 382 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 MGAT1P26572 445 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 AKT1P31749 480 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 CRYBB1P53674 252 aaPredicted RBP12.62□□□□□ -0.39
COLCA1-201ENST00000355430 TWF1Q12792 350 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 THEMIS2Q5TEJ8 643 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 IYDQ6PHW0 289 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 CES3Q6UWW8 571 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 IFNEQ86WN2 208 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 CHST12Q9NRB3 414 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 NOCTQ9UK39 431 aaKnown RBP12.62□□□□□ -0.39
COLCA1-201ENST00000355430 C2CD2Q9Y426 696 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
COLCA1-201ENST00000355430 OXCT1P55809 520 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 SEL1L3Q68CR1 1132 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 UNC45BQ8IWX7 931 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 OLA1Q9NTK5 396 aaKnown RBP12.62□□□□□ -0.39
COLCA1-201ENST00000355430 ARL8BQ9NVJ2 186 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 SIGLEC16A6NMB1 481 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 LAG3P18627 525 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 C15orf59Q2T9L4 293 aaPredicted RBP12.62□□□□□ -0.39
COLCA1-201ENST00000355430 ZACNQ401N2 412 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 CDC26Q8NHZ8 85 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 ZNF398Q8TD17 642 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 LRRN4Q8WUT4 740 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 ACSS3Q9H6R3 686 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 LRRC40Q9H9A6 602 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 ETNK2Q9NVF9 386 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 SLC12A4Q9UP95 1085 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 LAMA4Q16363 1823 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 H2AFYO75367 372 aaKnown RBP12.62□□□□□ -0.39
COLCA1-201ENST00000355430 APOA4P06727 396 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 TFE3P19532 575 aaPredicted RBP12.62□□□□□ -0.39
COLCA1-201ENST00000355430 TNFSF9P41273 254 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 OCA2Q04671 838 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 MGAT5Q09328 741 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 KCNA10Q16322 511 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 ZNF557Q8N988 423 aaPredicted RBP12.62□□□□□ -0.39
COLCA1-201ENST00000355430 CINPQ9BW66 212 aaPredicted RBP12.62□□□□□ -0.39
COLCA1-201ENST00000355430 PORCNQ9H237 461 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 CORO1CQ9ULV4 474 aaPredicted RBP12.62□□□□□ -0.39
COLCA1-201ENST00000355430 SNX5Q9Y5X3 404 aa12.62□□□□□ -0.39
COLCA1-201ENST00000355430 SLC9A3R1O14745 358 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms