RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 ASB7Q9H672 318 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 MID2Q9UJV3 735 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 SCN7AQ01118 1682 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 NELFEP18615 380 aaKnown RBP11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 FDFT1P37268 417 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 LAMC2Q13753 1193 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 BLMHQ13867 455 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 GRIK4Q16099 956 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 ITPRIPL1Q6GPH6 555 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 NOTUMQ6P988 496 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 MTHFD1LQ6UB35 978 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 PIGZQ86VD9 579 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 NUP93Q8N1F7 819 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 SLC7A6OSQ96CW6 309 aaPredicted RBP11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 NXF3Q9H4D5 531 aaKnown RBP11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 WDCPQ9H6R7 721 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 VAPBO95292 243 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 BPGMP07738 259 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 ITGA2BP08514 1039 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 FAM200BP0CF97 657 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 CCNB1P14635 433 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 FGFR3P22607 806 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 ATICP31939 592 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 GP5P40197 560 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 GPD2P43304 727 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 SLC10A6Q3KNW5 377 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 CYP2R1Q6VVX0 501 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 UTP4Q969X6 686 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 SEMA6AQ9H2E6 1030 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 LRRC40Q9H9A6 602 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 PRKAG3Q9UGI9 489 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 ITGA11Q9UKX5 1188 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 SSX2IPQ9Y2D8 614 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 ARAP2Q8WZ64 1704 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 CASTOR2A6NHX0 329 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 ITM2AO43736 263 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 GMNNO75496 209 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 SLC25A27O95847 323 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 MYCP01106 439 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 USP17L7P0C7H9 530 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 MOGSQ13724 837 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 CSHL1Q14406 222 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 PCDH20Q8N6Y1 951 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 SNX31Q8N9S9 440 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 P2RY11Q96G91 374 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 COPS7BQ9H9Q2 264 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 DDX18Q9NVP1 670 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 HBS1LQ9Y450 684 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 C2CD4BA6NLJ0 364 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 B4GALT4O60513 344 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 NOL3O60936 208 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 NEK3P51956 506 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 CERCAMQ5T4B2 595 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 SEL1L3Q68CR1 1132 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 ANO7Q6IWH7 933 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 IRGCQ6NXR0 463 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 KLC3Q6P597 504 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 C15orf39Q6ZRI6 1047 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 METTL23Q86XA0 190 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 ATPAF2Q8N5M1 289 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 GABPB2Q8TAK5 448 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 OLIG1Q8TAK6 271 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 ATP6V1E2Q96A05 226 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 MIPEPQ99797 713 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 CAAP1Q9H8G2 361 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 CORO1CQ9ULV4 474 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 PCDHGC3Q9UN70 934 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 CDYLQ9Y232 598 aa11.36□□□□□ -0.59
SEMA4D-201ENST00000339861 PIGNO95427 931 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 CYP2B6P20813 491 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 LMO2P25791 158 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 DGKDQ16760 1214 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 DRICH1Q6PGQ1 229 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 PACS1Q6VY07 963 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 CTU1Q7Z7A3 348 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 CSPG4P5Q96PW8 444 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 NIFKQ9BYG3 293 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 LHX5Q9H2C1 402 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 FAM96AQ9H5X1 160 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 CLIC5Q9NZA1 410 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 UBQLN1Q9UMX0 589 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 SNX10Q9Y5X0 201 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 A0A0A0MRY4 1105 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 DCAF8L1A6NGE4 600 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 TRDMT1O14717 391 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 AKAP10O43572 662 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 MFSD11O43934 449 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 ANKRD20A4Q4UJ75 823 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 KCNMB4Q86W47 210 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 OPTNQ96CV9 577 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 SPATA13Q96N96 652 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 PCYT2Q99447 389 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 SPON2Q9BUD6 331 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 ULBP1Q9BZM6 244 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 VPS33BQ9H267 617 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 SIX4Q9UIU6 781 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 KIAA1257Q9ULG3 409 aa11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 BUD23O43709 281 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-201ENST00000339861 TSPAN3O60637 253 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms