RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 SMARCAL1Q9NZC9 954 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 GMEB2Q9UKD1 530 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 BAG5Q9UL15 447 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 SLC39A10Q9ULF5 831 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 RRP9O43818 475 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 CLDN11O75508 207 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 CTSEP14091 401 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 HADHAP40939 763 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 RAD23BP54727 409 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 GNGT1P63211 74 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 PHEXP78562 749 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 GRSF1Q12849 480 aaKnown RBP eCLIP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 RBBP7Q16576 425 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 KAT2BQ92831 832 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 SPACA7Q96KW9 195 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 VAT1Q99536 393 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 LACRTQ9GZZ8 138 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 LRRC40Q9H9A6 602 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 UTP6Q9NYH9 597 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 TRMT6Q9UJA5 497 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 DRG1Q9Y295 367 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 CAPN6Q9Y6Q1 641 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 INPPL1O15357 1258 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 CTIFO43310 598 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 RARAP10276 462 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 HSPA8P11142 646 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 MTHFRP42898 656 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 ITGA8P53708 1063 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 HDAC4P56524 1084 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 PFKPQ01813 784 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 PRKCQQ04759 706 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 ENPEPQ07075 957 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 SLC25A52Q3SY17 297 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 POM121L1PQ3SYA9 428 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 SETMARQ53H47 684 aaPredicted RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 KREMEN1Q96MU8 473 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 LRRC1Q9BTT6 524 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 SNRNP25Q9BV90 132 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 ATP13A3Q9H7F0 1226 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 ABCB6Q9NP58 842 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 RBM12Q9NTZ6 932 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 CPSF2Q9P2I0 782 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 ZNF212Q9UDV6 495 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 SUN2Q9UH99 717 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 MRFAP1Q9Y605 127 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 DDX60Q8IY21 1712 aaKnown RBP9.49□□□□□ -0.89
PTPRE-202ENST00000306042 SDR42E2A6NKP2 422 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 GRM6O15303 877 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 CA3P07451 260 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 MSH3P20585 1137 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 SERPINB9P50453 376 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 STAT4Q14765 748 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 HABP4Q5JVS0 413 aaKnown RBP9.49□□□□□ -0.89
PTPRE-202ENST00000306042 MFSD7Q6UXD7 560 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 CCNJLQ8IV13 435 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 ZNF461Q8TAF7 563 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 ARHGEF2Q92974 986 aaKnown RBP9.49□□□□□ -0.89
PTPRE-202ENST00000306042 FAXDC2Q96IV6 333 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.49□□□□□ -0.89
PTPRE-202ENST00000306042 FAM153AQ9UHL3 310 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 TNRC6CQ9HCJ0 1690 aaKnown RBP9.49□□□□□ -0.89
PTPRE-202ENST00000306042 IFRD1O00458 451 aaPredicted RBP9.49□□□□□ -0.89
PTPRE-202ENST00000306042 MAGEC1O60732 1142 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 OPHN1O60890 802 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 ZNF623O75123 536 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 PAGE1O75459 146 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 TADA3O75528 432 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 SEC31AO94979 1220 aaKnown RBP9.49□□□□□ -0.89
PTPRE-202ENST00000306042 RB1P06400 928 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 GAD2Q05329 585 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 SOWAHAQ2M3V2 549 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 ANGPTL8Q6UXH0 198 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 LRRC49Q8IUZ0 686 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 ABHD8Q96I13 439 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 NAT9Q9BTE0 207 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 PKD2L2Q9NZM6 624 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 CD274Q9NZQ7 290 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 PTPRJQ12913 1337 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 HACD1B0YJ81 288 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 ERBB2P04626 1255 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 CCNG2Q16589 344 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 C3orf62Q6ZUJ4 267 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 TRMT11Q7Z4G4 463 aaKnown RBP9.49□□□□□ -0.89
PTPRE-202ENST00000306042 FAM124AQ86V42 546 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 CFAP52Q8N1V2 620 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 SLC4A11Q8NBS3 891 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 TRMT61BQ9BVS5 477 aaKnown RBP9.49□□□□□ -0.89
PTPRE-202ENST00000306042 CNOT10Q9H9A5 744 aaKnown RBP9.49□□□□□ -0.89
PTPRE-202ENST00000306042 TAS2R14Q9NYV8 317 aa9.49□□□□□ -0.89
PTPRE-202ENST00000306042 TMEM247A6NEH6 219 aa9.48□□□□□ -0.89
PTPRE-202ENST00000306042 VPS26AO75436 327 aa9.48□□□□□ -0.89
PTPRE-202ENST00000306042 KCNA5P22460 613 aa9.48□□□□□ -0.89
PTPRE-202ENST00000306042 BMPR1AP36894 532 aa9.48□□□□□ -0.89
PTPRE-202ENST00000306042 RASSF2P50749 326 aa9.48□□□□□ -0.89
PTPRE-202ENST00000306042 ERVK-21P61565 698 aa9.48□□□□□ -0.89
PTPRE-202ENST00000306042 NNTQ13423 1086 aa9.48□□□□□ -0.89
PTPRE-202ENST00000306042 SPARCL1Q14515 664 aa9.48□□□□□ -0.89
PTPRE-202ENST00000306042 CRLF3Q8IUI8 442 aa9.48□□□□□ -0.89
PTPRE-202ENST00000306042 KCNK16Q96T55 309 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms