RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 UMODL1Q5DID0 1318 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 A0A0B4J269 797 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 VAPBO95292 243 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 ABHD2P08910 425 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 NUDT17P0C025 328 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 SMIM10L2AP0DMW4 78 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 SMIM10L2BP0DMW5 78 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 ERVK-10P10266 1014 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 PSMB4P28070 264 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 OR1E1P30953 314 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 DRG2P55039 364 aaKnown RBP16.73■□□□□ 0.27
BRD3-201ENST00000303407 SCARA3Q6AZY7 606 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 ZNF470Q6ECI4 717 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 VPS37AQ8NEZ2 397 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 MRPS31Q92665 395 aaKnown RBP16.73■□□□□ 0.27
BRD3-201ENST00000303407 KREMEN1Q96MU8 473 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 PPP1R10Q96QC0 940 aaKnown RBP16.73■□□□□ 0.27
BRD3-201ENST00000303407 SNRNP25Q9BV90 132 aaKnown RBP16.73■□□□□ 0.27
BRD3-201ENST00000303407 STK25O00506 426 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 TRIM13O60858 407 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 USP12O75317 370 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 MAP3K10Q02779 954 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 AGKQ53H12 422 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 OTOAQ7RTW8 1153 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 RASGEF1CQ8N431 466 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 LRRC39Q96DD0 335 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 FAM84AQ96KN4 292 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 SENP8Q96LD8 212 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 PRPF18Q99633 342 aaKnown RBP16.73■□□□□ 0.27
BRD3-201ENST00000303407 PRKD2Q9BZL6 878 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 RRAGCQ9HB90 399 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 VTI1BQ9UEU0 232 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 APPL1Q9UKG1 709 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 STARD13Q9Y3M8 1113 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 RGPD8O14715 1765 aaPredicted RBP16.73■□□□□ 0.27
BRD3-201ENST00000303407 FSCN2O14926 492 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 FSBPO95073 299 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 NOS2P35228 1153 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 RENBPP51606 427 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 WSCD1Q658N2 575 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 LZTR1Q8N653 840 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 CLCA2Q9UQC9 943 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 HES2Q9Y543 173 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 NRCAMQ92823 1304 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 USP1O94782 785 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 MLH1P40692 756 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 HIST2H2ACQ16777 129 aaPredicted RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 TREML2Q5T2D2 321 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 HIST2H2AA3Q6FI13 130 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 CENPLQ8N0S6 344 aaPredicted RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 KYQ8NBH2 561 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 WNT8BQ93098 351 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 ERI2A8K979 691 aaKnown RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 EPHB3P54753 998 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 KYAT3Q6YP21 454 aaKnown RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 PLD3Q8IV08 490 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 ZNF786Q8N393 782 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 SOCS4Q8WXH5 440 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 GFM2Q969S9 779 aaKnown RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 PRDM16Q9HAZ2 1276 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 CACNA1FO60840 1977 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 A0A0A0MRY4 1105 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 DDHD2O94830 711 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 URODP06132 367 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 ZCCHC18P0CG32 403 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 FAM171A1Q5VUB5 890 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 PATL1Q86TB9 770 aaKnown RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 PACS2Q86VP3 889 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 SPATA13Q96N96 652 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 RNF157Q96PX1 679 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 ATXN3LQ9H3M9 355 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 RGS18Q9NS28 235 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 MANSC4A6NHS7 340 aaPredicted RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 TBKBP1A7MCY6 615 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 CKMP06732 381 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 CLK2P49760 499 aaKnown RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 PEX5P50542 639 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 PRKAA2P54646 552 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 TCHHL1Q5QJ38 904 aaPredicted RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 ALG3Q92685 438 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 SPATA16Q9BXB7 569 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 RMND5AQ9H871 391 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 ERVK-5Q9HDB9 667 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 XRN1Q8IZH2 1706 aaKnown RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 ZC3H12BQ5HYM0 836 aaKnown RBP16.72■□□□□ 0.27
BRD3-201ENST00000303407 TRPM4Q8TD43 1214 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 HSD3B7Q9H2F3 369 aa16.72■□□□□ 0.27
BRD3-201ENST00000303407 HNRNPRO43390 633 aaKnown RBP16.71■□□□□ 0.27
BRD3-201ENST00000303407 TSPAN3O60637 253 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 CCNE2O96020 404 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 MT-CO1P00395 513 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 SERPINF2P08697 491 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 ATP6V1E1P36543 226 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 FLT3P36888 993 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 CRADDP78560 199 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 PGS1Q32NB8 556 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 ZC3H12AQ5D1E8 599 aaKnown RBP16.71■□□□□ 0.27
BRD3-201ENST00000303407 C16orf46Q6P387 395 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 ARRDC4Q8NCT1 418 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 GAD1Q99259 594 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms