RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 TNFRSF8P28908 595 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 AFF1P51825 1210 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 RCAN1P53805 252 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 RAB2AP61019 212 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 CYP27A1Q02318 531 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PPARAQ07869 468 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PDIA2Q13087 525 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM47AQ5JRC9 791 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM209AQ5JX71 171 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 TYW3Q6IPR3 259 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 H2AFVQ71UI9 128 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 MREGQ8N565 214 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 MARCH10Q8NA82 808 aaPredicted RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 SECISBP2Q96T21 854 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 EIF2AK1Q9BQI3 630 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 KLC2Q9H0B6 622 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 POLR1BQ9H9Y6 1135 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 MCUBQ9NWR8 336 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 ERAP1Q9NZ08 941 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PKD2L1Q9P0L9 805 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PI4KBQ9UBF8 816 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PTBP2Q9UKA9 531 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 DNAJC16Q9Y2G8 782 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PSMD9O00233 223 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 DDX3XO00571 662 aaKnown RBP eCLIP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 RPS6KA4O75676 772 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 IGKV5-2P06315 115 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 HSPD1P10809 573 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 EIF2AK2P19525 551 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 TNFAIP3P21580 790 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PDIA3P30101 505 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 OR2B6P58173 313 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 COG2Q14746 738 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 NCF4Q15080 339 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 TTBK2Q6IQ55 1244 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 C4orf50Q6ZRC1 276 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 VASH1Q7L8A9 365 aaPredicted RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 SEPT12Q8IYM1 358 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 EXD1Q8NHP7 514 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 CCDC120Q96HB5 630 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 FAR2Q96K12 515 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM167AQ96KS9 214 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PPP1R10Q96QC0 940 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 SMAD5Q99717 465 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 COL15A1P39059 1388 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 RXRBP28702 533 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 ADD1P35611 737 aaKnown RBP6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 NUDT1P36639 197 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 QARSP47897 775 aaKnown RBP6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 PTH1RQ03431 593 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF33BQ06732 778 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 VPS72Q15906 364 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF792Q3KQV3 632 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 ERFEQ4G0M1 354 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC45A4Q5BKX6 768 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 SPOPLQ6IQ16 392 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 LRRC8EQ6NSJ5 796 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 RAD9BQ6WBX8 426 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 KRT26Q7Z3Y9 468 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 CDKL3Q8IVW4 592 aaPredicted RBP6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 EPS8L1Q8TE68 723 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 TBCBQ99426 244 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF416Q9BWM5 594 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 KIAA1683Q9H0B3 1180 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 TTYH1Q9H313 450 aaPredicted RBP6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 CACNA2D2Q9NY47 1150 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 COQ3Q9NZJ6 369 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 NPHP3-ACAD11A0A0J9YXS1 232 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 TRIM49BA6NDI0 452 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 TRIM49D1C9J1S8 452 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 PLK4O00444 970 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 RIPK2O43353 540 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 CST8O60676 142 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 CBX6O95503 412 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 SBK2P0C263 348 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 SRCP12931 536 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 PHKA2P46019 1235 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 RPS6KA2Q15349 733 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 PMF1Q6P1K2 205 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 Q6ZNX1 250 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 FKBP9P1Q75LS8 142 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 ADAT2Q7Z6V5 191 aaKnown RBP6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 MAP4K1Q92918 833 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF274Q96GC6 653 aaPredicted RBP6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 WRNIP1Q96S55 665 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 ZKSCAN3Q9BRR0 538 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 SEC31BQ9NQW1 1179 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 PRG3Q9Y2Y8 225 aaPredicted RBP6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 PCDHGB3Q9Y5G1 929 aa6.9□□□□□ -1.31
PDGFRA-201ENST00000257290 MED23Q9ULK4 1368 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PEX11AO75192 247 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ARIH2O95376 493 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PRLRP16471 622 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ITIH2P19823 946 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 HOXD13P35453 343 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 NFX1Q12986 1120 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 AADACL4Q5VUY2 407 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 MZT2BQ6NZ67 158 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 DEPDC4Q8N2C3 294 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms