RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PNPLA4P41247 253 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 SHROOM1Q2M3G4 852 aaPredicted RBP13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 LLGL2Q6P1M3 1020 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 GLT6D1Q7Z4J2 308 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 FBXO30Q8TB52 745 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 RMND5AQ9H871 391 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 LRRC4BQ9NT99 713 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 A0A096LPK6 155 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 PSMD11O00231 422 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 MIPP30301 263 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 IL17AQ16552 155 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 ZSWIM7Q19AV6 140 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 MIEF1Q9NQG6 463 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 IQCMA0A1B0GVH7 501 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 TOMM70O94826 608 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 DDNO94850 711 aaPredicted RBP13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 PSMB4P28070 264 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 TNFSF9P41273 254 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 BST2Q10589 180 aaKnown RBP13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 CSTF3Q12996 717 aaKnown RBP13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 MARK2Q7KZI7 788 aaKnown RBP13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 LUZP2Q86TE4 346 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 TMEM169Q96HH4 297 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 TKTL2Q9H0I9 626 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 BTRCQ9Y297 605 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 MTFR1Q15390 333 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 ARHGAP15Q53QZ3 475 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 FBXO47Q5MNV8 452 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 LRRC74BQ6ZQY2 392 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 CCDC149Q6ZUS6 474 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 SETD3Q86TU7 594 aaPredicted RBP13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 FBXO6Q9NRD1 293 aaPredicted RBP13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 SEPT3Q9UH03 358 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 PPRC1Q5VV67 1664 aaKnown RBP13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 GPR182O15218 404 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 ALOX12P18054 663 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 SOX6P35712 828 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 FAM171A1Q5VUB5 890 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 TMEM26Q6ZUK4 368 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 RNF180Q86T96 592 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 LGI2Q8N0V4 545 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 OR52K1Q8NGK4 314 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 CASP10Q92851 521 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 DYRK1BQ9Y463 629 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 PDZK1P1A8MUH7 402 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 PEX5P50542 639 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 RSBN1Q5VWQ0 802 aaPredicted RBP13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 ITSN1Q15811 1721 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 DIP2AQ14689 1571 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 ATG7O95352 703 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 NFICP08651 508 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 YBX3P16989 372 aaKnown RBP eCLIP13.9□□□□□ -0.188e-7■■■□□ 15.9
TGFBR3-201ENST00000212355 ADCYAP1R1P41586 468 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 KCNT2Q6UVM3 1135 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 OTOP1Q7RTM1 612 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 STK32CQ86UX6 486 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 HTR3CQ8WXA8 447 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 CAVIN3Q969G5 261 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 TBL1YQ9BQ87 522 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 MCM8Q9UJA3 840 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 DUSP12Q9UNI6 340 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 PLA2G4CQ9UP65 541 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 EIF2B2P49770 351 aaKnown RBP13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 PLD1Q13393 1074 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 LAMB3Q13751 1172 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 COMMD2Q86X83 199 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 CREG2Q8IUH2 290 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 COLEC11Q9BWP8 271 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 SPRTNQ9H040 489 aaPredicted RBP13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 ALG9Q9H6U8 611 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 DCLRE1BQ9H816 532 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 SPON1Q9HCB6 807 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 XPNPEP3Q9NQH7 507 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 PDP2Q9P2J9 529 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 SPATA2Q9UM82 520 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 PTPRMP28827 1452 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 GMFGO60234 142 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 ACOX1Q15067 660 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 TTLL9Q3SXZ7 439 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 PLEKHH3Q7Z736 793 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 ALYREFQ86V81 257 aaKnown RBP13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 KYQ8NBH2 561 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 DEPDC7Q96QD5 511 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 TMCC3Q9ULS5 477 aa13.9□□□□□ -0.18
TGFBR3-201ENST00000212355 DNALI1O14645 258 aaPredicted RBP13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 FFAR3O14843 346 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 GPR42O15529 346 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 CAPN15O75808 1086 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 NPY2RP49146 381 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 HIRAP54198 1017 aaPredicted RBP13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 CDC42EP1Q00587 391 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 TIGD7Q6NT04 549 aaPredicted RBP13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 EPHX4Q8IUS5 362 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 KRT78Q8N1N4 520 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 GRIN3AQ8TCU5 1115 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 FOXP3Q9BZS1 431 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 DPY30Q9C005 99 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 KIAA1683Q9H0B3 1180 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 RPS6KB2Q9UBS0 482 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms