RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Rpl9-ps6A0A140T8T4 192 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Mmrn1B2RPV6 1210 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Zscan5bB2RTN3 468 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Ldlrad1D3YYZ1 218 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Kctd18E0CZ26 429 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 ZfaP23607 742 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Rpl9P51410 192 aaKnown RBP7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Rpl22P67984 128 aaKnown RBP7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Pdcd1Q02242 288 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Col6a1Q04857 1025 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Adad1Q5SUE7 619 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Nrg1Q6DR99 700 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Sec23ipQ6NZC7 998 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 LnpkQ7TQ95 425 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Rnf187Q8BFX1 236 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Fbxo38Q8BMI0 1194 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Nipal4Q8BZF2 406 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Acad9Q8JZN5 625 aaKnown RBP7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Gsto2Q8K2Q2 248 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Slc25a3Q8VEM8 357 aaKnown RBP7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 LrgukQ9D5S7 820 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Calr3Q9D9Q6 380 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 NumbQ9QZS3 653 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Map3k6Q9WTR2 1291 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Gys1Q9Z1E4 738 aaKnown RBP7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Ppp1r36D3Z0R2 411 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Wdr95D3Z7A8 784 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Gm6588E9Q3K0 461 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Man2b1O09159 1013 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Zfpm1O35615 995 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Wnt6P22727 364 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Apobec1P51908 229 aaKnown RBP7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Lig3P97386 1015 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 AxlQ00993 888 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Mylk3Q3UIZ8 795 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Plcl1Q3USB7 1096 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 KrtdapQ3V2T4 102 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Soat1Q61263 540 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 PrkciQ62074 595 aaKnown RBP7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Itga3Q62470 1053 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Proser3Q7TSA6 634 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Baiap2l2Q80Y61 522 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Orai2Q8BH10 250 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Hspbap1Q8BK58 483 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Phactr3Q8BYK5 558 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Pak5Q8C015 719 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Nlrp4bQ8C6J9 863 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Gramd4Q8CB44 633 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Mkl1Q8K4J6 964 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Atpaf2Q91YY4 289 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Cog2Q921L5 731 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Ddx50Q99MJ9 734 aaKnown RBP7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Ddx47Q9CWX9 455 aaKnown RBP7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Ccdc124Q9D8X2 217 aaKnown RBP7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Phf2Q9WTU0 1096 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Snx1Q9WV80 522 aa7.73□□□□□ -1.17
Usp40-204ENSMUST00000187758 Scn5aQ9JJV9 2019 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Cntnap3E9PY62 1287 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Vmn2r67K7N6T2 851 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Chrm1P12657 460 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Ptger1P35375 405 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Krt32Q62168 407 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Znf821Q6PD05 413 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Sept10Q8C650 452 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Spats2Q8K1N4 545 aaKnown RBP7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Nol6Q8R5K4 1152 aaKnown RBP7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Cybrd1Q925G2 290 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 NonoQ99K48 473 aaKnown RBP7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Nxnl2Q9D531 156 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Fam209A2APA5 170 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Zfp472B0V2W5 534 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Dpysl2O08553 572 aaKnown RBP7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Hmga1P17095 107 aaKnown RBP7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Rab6bP61294 208 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 SiaeP70665 541 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 TceancQ3US16 359 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Ccdc181Q80ZU5 509 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Efcab14Q8BGQ6 484 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Slc7a4Q8BLQ7 635 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Stx16Q8BVI5 326 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Dennd1aQ8K382 1016 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Usp3Q91W36 520 aaKnown RBP7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Pcdha1Q91Y21 948 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Fads1Q920L1 447 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 St13Q99L47 371 aaKnown RBP7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Tsga13Q9DA17 273 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 QkiQ9QYS9 341 aaKnown RBP7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Sept3Q9Z1S5 350 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 JrklB2RRL2 523 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Vmn2r27D3YUK6 857 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Shoc2O88520 582 aaKnown RBP7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 ShdO88834 343 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Psma2P49722 234 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 TubP50586 505 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 PolgP54099 1218 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Hoxd13P70217 339 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 PterQ60866 349 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Krt42Q6IFX2 452 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Vmn2r26Q6TAC4 855 aa7.72□□□□□ -1.17
Usp40-204ENSMUST00000187758 Socs7Q8VHQ2 579 aa7.72□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms