RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 FUT11Q495W5 492 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 DCPSQ96C86 337 aaKnown RBP15.44■□□□□ 0.06
UBE3A-227ENST00000638011 SPON2Q9BUD6 331 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 ZNF518BQ9C0D4 1074 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 SIK2Q9H0K1 926 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 LRMDAQ9H2I8 198 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 MROH7-TTC4A0A0A0MT08 1334 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 AKAP1Q92667 903 aaKnown RBP eCLIP15.44■□□□□ 0.06
UBE3A-227ENST00000638011 CNKSR1Q969H4 720 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 PGM2Q96G03 612 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 NT5C1AQ9BXI3 368 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 C17orf75Q9HAS0 396 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 COMTP21964 271 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 PTENP60484 403 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 NFX1Q12986 1120 aaKnown RBP15.44■□□□□ 0.06
UBE3A-227ENST00000638011 RIPK1Q13546 671 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 CCNIQ14094 377 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 BHLHB9Q6PI77 547 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 C11orf74Q86VG3 221 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 PEX5LQ8IYB4 626 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 VPS51Q9UID3 782 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 TRDMT1O14717 391 aaKnown RBP15.44■□□□□ 0.06
UBE3A-227ENST00000638011 CAMK2GQ13555 558 aaPredicted RBP15.44■□□□□ 0.06
UBE3A-227ENST00000638011 MTF1Q14872 753 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 PDCD4Q53EL6 469 aaKnown RBP15.44■□□□□ 0.06
UBE3A-227ENST00000638011 EPS8L3Q8TE67 593 aaKnown RBP15.44■□□□□ 0.06
UBE3A-227ENST00000638011 PAFAH2Q99487 392 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 ADGRE3Q9BY15 652 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 DGCR6LQ9BY27 220 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 SNX7Q9UNH6 387 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 RPL22P35268 128 aaKnown RBP15.44■□□□□ 0.06
UBE3A-227ENST00000638011 NEK3P51956 506 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 PSME3P61289 254 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 GJD3Q8N144 294 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 SCAIQ8N9R8 606 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 SLC30A5Q8TAD4 765 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 FEZF2Q8TBJ5 459 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 CASKIN2Q8WXE0 1202 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 PIK3R3Q92569 461 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 TRIM2Q9C040 744 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 COPS7BQ9H9Q2 264 aaPredicted RBP15.44■□□□□ 0.06
UBE3A-227ENST00000638011 FAM49BQ9NUQ9 324 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.44■□□□□ 0.068e-7■■■■□ 22.7
UBE3A-227ENST00000638011 RAB21Q9UL25 225 aa15.44■□□□□ 0.06
UBE3A-227ENST00000638011 NOL4O94818 638 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 DPYDQ12882 1025 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 TTLL4Q14679 1199 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 ALX1Q15699 326 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 RNF43Q68DV7 783 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 FOXP4Q8IVH2 680 aaPredicted RBP15.43■□□□□ 0.06
UBE3A-227ENST00000638011 FAM126BQ8IXS8 530 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 TRMT2AQ8IZ69 625 aaKnown RBP15.43■□□□□ 0.06
UBE3A-227ENST00000638011 MYO1HQ8N1T3 1032 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 AGAP3Q96P47 875 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 TMEM117Q9H0C3 514 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 MED28Q9H204 178 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 ZNF302Q9NR11 478 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 CKLFQ9UBR5 152 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 LSM8O95777 96 aaKnown RBP15.43■□□□□ 0.06
UBE3A-227ENST00000638011 ALADP13716 330 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 NCOA4Q13772 614 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 GRTP1Q5TC63 336 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 RNF145Q96MT1 663 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 EMILIN2Q9BXX0 1053 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 MAN1C1Q9NR34 630 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 RAB26Q9ULW5 256 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 UBQLN1Q9UMX0 589 aaKnown RBP15.43■□□□□ 0.06
UBE3A-227ENST00000638011 ABCA9Q8IUA7 1624 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 EPN2O95208 641 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 TRIM74Q86UV6 250 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 TRIM73Q86UV7 250 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 EPB41L1Q9H4G0 881 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 PIH1D3Q9NQM4 214 aaKnown RBP15.43■□□□□ 0.06
UBE3A-227ENST00000638011 TRPM1Q7Z4N2 1603 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 TSPAN4O14817 238 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 ZC3H11AO75152 810 aaKnown RBP eCLIP15.43■□□□□ 0.06
UBE3A-227ENST00000638011 DGAT1O75907 488 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 LYNP07948 512 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 CDK16Q00536 496 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 SNRNP35Q16560 246 aaKnown RBP15.43■□□□□ 0.06
UBE3A-227ENST00000638011 AKIRIN2Q53H80 203 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 C1orf189Q5VU69 101 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 EDC3Q96F86 508 aaKnown RBP15.43■□□□□ 0.06
UBE3A-227ENST00000638011 MAGEE1Q9HCI5 957 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 SYNPO2Q9UMS6 1093 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 CPA3P15088 417 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 ALDH1A3P47895 512 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 SKIV2LQ15477 1246 aaKnown RBP15.43■□□□□ 0.06
UBE3A-227ENST00000638011 SLC9A4Q6AI14 798 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 GPALPP1Q8IXQ4 340 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 CPNE1Q99829 537 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 CLPBQ9H078 707 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 ABCG2Q9UNQ0 655 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 GRIK3Q13003 919 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 DPY19L2Q6NUT2 758 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 SLC9A6Q92581 669 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 DSEQ9UL01 958 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 ADGRL2O95490 1459 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 CHST10O43529 356 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 C15orf59Q2T9L4 293 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms