RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TMEM150BA6NC51 233 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 EML1O00423 815 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 CYTH3O43739 400 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 VPS26AO75436 327 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 KCNMA1Q12791 1236 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 DIS3LQ8TF46 1054 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 SUSD6Q92537 303 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 TSEN34Q9BSV6 310 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 GANQ9H2C0 597 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 ADGRA2Q96PE1 1338 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 MAFO75444 373 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 ZNF333Q96JL9 665 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 C1QTNF7Q9BXJ2 289 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 CLPBQ9H078 707 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 RAD54BQ9Y620 910 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 TRAV19A0A0A6YYK7 116 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 SPTLC1O15269 473 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 SOX6P35712 828 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 PPIGQ13427 754 aaKnown RBP eCLIP13.64□□□□□ -0.231e-6■■■□□ 17.1
SMARCA4-216ENST00000591545 ACSF2Q96CM8 615 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 WWOXQ9NZC7 414 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 ZBTB39O15060 712 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 ATP6V1B1P15313 513 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 CD52P31358 61 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 CSE1LP55060 971 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 OVGP1Q12889 678 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 LAYNQ6UX15 382 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 SLC2A14Q8TDB8 520 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 HELQQ8TDG4 1101 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 SH3GL2Q99962 352 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 EVA1BQ9NVM1 165 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 SERPINF2P08697 491 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 C4BPBP20851 252 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 SCNN1BP51168 640 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 BTKQ06187 659 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 CAMK2GQ13555 558 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 ITGA9Q13797 1035 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 ZNF268Q14587 947 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 MARC1Q5VT66 337 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 PCDH9Q9HC56 1237 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 ST3GAL5Q9UNP4 418 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 NFAT5O94916 1531 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 TBC1D3BA6NDS4 549 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 TSPAN3O60637 253 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 GCNT1Q02742 428 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 C1QBPQ07021 282 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 FNDC3BQ53EP0 1204 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 SPOCD1Q6ZMY3 1216 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 LZTR1Q8N653 840 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 FBXO25Q8TCJ0 367 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 PNMA5Q96PV4 448 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 TBCBQ99426 244 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 IL1RL2Q9HB29 575 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 GPATCH2LQ9NWQ4 482 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 F8VZ95 297 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 IGSF6O95976 241 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 CSH1P0DML2 217 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 CSH2P0DML3 217 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 IMPDH2P12268 514 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 BDNFP23560 247 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 GRK3P35626 688 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 PLCL1Q15111 1095 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 RASA2Q15283 850 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 KIAA0319LQ8IZA0 1049 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 EIF1ADQ8N9N8 165 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 PPTC7Q8NI37 304 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 SLC20A1Q8WUM9 679 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 BRD8Q9H0E9 1235 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 NT5MQ9NPB1 228 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 CHORDC1Q9UHD1 332 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 GIT1Q9Y2X7 761 aa13.63□□□□□ -0.23
SMARCA4-216ENST00000591545 RBAK-RBAKDNI3L0D1 243 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 JCHAINP01591 159 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 POLR2EP19388 210 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 OR1E1P30953 314 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 RPL9P32969 192 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 ATP5C1P36542 298 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 PURAQ00577 322 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 UNC93AQ86WB7 457 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 THUMPD3Q9BV44 507 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 TMEM120AQ9BXJ8 343 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 ZCCHC2Q9C0B9 1178 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 OSGEPL1Q9H4B0 414 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 UTP6Q9NYH9 597 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 SPG21Q9NZD8 308 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 AKAP7Q9P0M2 348 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 PSMD10O75832 226 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 SUPT7LO94864 414 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 FGBP02675 491 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 OTUD4Q01804 1114 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 UBE3AQ05086 875 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 PRMT9Q6P2P2 845 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 LBX2Q6XYB7 198 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 MTMR14Q8NCE2 650 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 UPF1Q92900 1129 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 MAF1Q9H063 256 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms