RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 TUBA4AP68366 448 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 ZNF543Q08ER8 600 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 EIF4A2Q14240 407 aaKnown RBP5.7□□□□□ -1.5
LINC00254-201ENST00000563416 ST3GAL2Q16842 350 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 PROSER3Q2NL68 480 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 KIRREL2Q6UWL6 708 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 SERPINA13PQ6UXR4 307 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 CCDC150Q8NCX0 1101 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 ZDHHC12Q96GR4 267 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 COLEC11Q9BWP8 271 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 UBA5Q9GZZ9 404 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 FLRT1Q9NZU1 646 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 STEAP1Q9UHE8 339 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 HPSEQ9Y251 543 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 FRMD4BQ9Y2L6 1034 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 FNDC1Q4ZHG4 1894 aaPredicted RBP5.7□□□□□ -1.5
LINC00254-201ENST00000563416 MYH14Q7Z406 1995 aaKnown RBP5.69□□□□□ -1.5
LINC00254-201ENST00000563416 TJP1Q07157 1748 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 ANO9A1A5B4 782 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 CLCA1A8K7I4 914 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 POC1B-GALNT4F8VUJ3 575 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 APAF1O14727 1248 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 AREL1O15033 823 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 LDHAP00338 332 aaKnown RBP5.69□□□□□ -1.5
LINC00254-201ENST00000563416 SLC5A1P13866 664 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 STT3AP46977 705 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 TFF2Q03403 129 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 KCNAB1Q14722 419 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 CC2D1BQ5T0F9 858 aaKnown RBP5.69□□□□□ -1.5
LINC00254-201ENST00000563416 SYCP2LQ5T4T6 812 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 LIX1LQ8IVB5 337 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 GALNT4Q8N4A0 578 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 VOPP1Q96AW1 172 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 SLC39A13Q96H72 371 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 VPS50Q96JG6 964 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 FAM227BQ96M60 508 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 FYTTD1Q96QD9 318 aaKnown RBP5.69□□□□□ -1.5
LINC00254-201ENST00000563416 MACROD1Q9BQ69 325 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 SEMA4CQ9C0C4 833 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 STARD7Q9NQZ5 370 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 MGAT4CQ9UBM8 478 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 MRC1P22897 1456 aa5.69□□□□□ -1.5
LINC00254-201ENST00000563416 C4AP0C0L4 1744 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 C4BP0C0L5 1744 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 KDM3BQ7LBC6 1761 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 A8MVJ9 347 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 USP1O94782 785 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 CHRM5P08912 532 aaPredicted RBP5.68□□□□□ -1.5
LINC00254-201ENST00000563416 MYL4P12829 197 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 IDEP14735 1019 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 TSHRP16473 764 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 FGFR2P21802 821 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 FPR3P25089 353 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 CERS1P27544 350 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 RBL1P28749 1068 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 PRIM2P49643 509 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 RENBPP51606 427 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 SRSF4Q08170 494 aaKnown RBP5.68□□□□□ -1.5
LINC00254-201ENST00000563416 CLCA4Q14CN2 919 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 RNASE12Q5GAN4 147 aaKnown RBP5.68□□□□□ -1.5
LINC00254-201ENST00000563416 MANEALQ5VSG8 457 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 USP17L6PQ6QN14 398 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 CATSPERGQ6ZRH7 1159 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 DEFB132Q7Z7B7 95 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 DPP9Q86TI2 863 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 VGLL2Q8N8G2 317 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 PNLDC1Q8NA58 520 aaKnown RBP5.68□□□□□ -1.5
LINC00254-201ENST00000563416 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 LRRC46Q96FV0 321 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 ASB2Q96Q27 587 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 MMS19Q96T76 1030 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 TBCBQ99426 244 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 EIF2AQ9BY44 585 aaKnown RBP5.68□□□□□ -1.5
LINC00254-201ENST00000563416 MAGEB5Q9BZ81 275 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 SLC25A32Q9H2D1 315 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 PRDM16Q9HAZ2 1276 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 RIMKLBQ9ULI2 386 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 PCDH11XQ9BZA7 1347 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 PCDH11YQ9BZA8 1340 aa5.68□□□□□ -1.5
LINC00254-201ENST00000563416 LAMB4A4D0S4 1761 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 PCSK5Q92824 1860 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 WIPF3A6NGB9 483 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 BTBD19C9JJ37 291 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 IFRD1O00458 451 aaPredicted RBP5.67□□□□□ -1.5
LINC00254-201ENST00000563416 APOL1O14791 398 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 GCATO75600 419 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 PPP2R1AP30153 589 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 LMAN2Q12907 356 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 PICALMQ13492 652 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 COLEC12Q5KU26 742 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 KLHDC7AQ5VTJ3 777 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 RRAGBQ5VZM2 374 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 CLEC9AQ6UXN8 241 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 ZNF782Q6ZMW2 699 aaPredicted RBP5.67□□□□□ -1.5
LINC00254-201ENST00000563416 SRRM1Q8IYB3 904 aaKnown RBP5.67□□□□□ -1.5
LINC00254-201ENST00000563416 FSTL5Q8N475 847 aaPredicted RBP5.67□□□□□ -1.5
LINC00254-201ENST00000563416 ADAMTS18Q8TE60 1221 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 DPF1Q92782 380 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 CTHRC1Q96CG8 243 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 CCDC17Q96LX7 622 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms