RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ARHGAP40Q5TG30 622 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 STXBP4Q6ZWJ1 553 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 EPM2AIP1Q7L775 607 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 TADA2BQ86TJ2 420 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 FAM217AQ8IXS0 508 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 CCDC65Q8IXS2 484 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 XXYLT1Q8NBI6 393 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 PLEKHO2Q8TD55 490 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 TTC9Q92623 222 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 NAF1Q96HR8 494 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 ARID3AQ99856 593 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 PANK2Q9BZ23 570 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 FBRSQ9HAH7 460 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 CLIC4Q9Y696 253 aa13.41□□□□□ -0.26
RABGGTA-213ENST00000560127 A0A1W2PR77 199 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 FAM47DPA6NHR8 397 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 EIF3DO15371 548 aaKnown RBP eCLIP13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 YKT6O15498 198 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 WISP1O95388 367 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 VNN1O95497 513 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 RALAP11233 206 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 HOXD9P28356 352 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 STAT6P42226 847 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 PSEN1P49768 467 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 TMPRSS3P57727 454 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 EFEMP1Q12805 493 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 BNIP3Q12983 259 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 NCOA4Q13772 614 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 KCNJ12Q14500 433 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 TTC31Q49AM3 519 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 SFMBT2Q5VUG0 894 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 CCDC73Q6ZRK6 1079 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 KANSL1Q7Z3B3 1105 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 CCDC186Q7Z3E2 898 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 ADIPOR2Q86V24 386 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 ZC3H3Q8IXZ2 948 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 ZNF248Q8NDW4 579 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 ZNF507Q8TCN5 953 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 HIC2Q96JB3 615 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 HNRNPABQ99729 332 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 CLIC5Q9NZA1 410 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 PLA2G4CQ9UP65 541 aa13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 SRPRBQ9Y5M8 271 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-213ENST00000560127 C10orf142B7Z368 130 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 CLSTN1O94985 981 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 C4BPAP04003 597 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 CKMT2P17540 419 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 CD38P28907 300 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 TXLNAP40222 546 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 GALCP54803 685 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 PCBP4P57723 403 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 PDE4CQ08493 712 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 BIRC3Q13489 604 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 ZNF776Q68DI1 518 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 NCEH1Q6PIU2 408 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 USP30Q70CQ3 517 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 CHST9Q7L1S5 443 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 KIAA0907Q7Z7F0 614 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 UNC93AQ86WB7 457 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 WFIKKN2Q8TEU8 576 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 SKA1Q96BD8 255 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 TWNKQ96RR1 684 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 CDK5RAP1Q96SZ6 601 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 PABPC3Q9H361 631 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 MTG2Q9H4K7 406 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 PNPLA8Q9NP80 782 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 GDF3Q9NR23 364 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 AASDHPPTQ9NRN7 309 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 SERGEFQ9UGK8 458 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 USP3Q9Y6I4 520 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 NOTCH2Q04721 2471 aa13.39□□□□□ -0.27
RABGGTA-213ENST00000560127 NBPF19A0A087WUL8 3843 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 COL27A1Q8IZC6 1860 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 SLC28A2O43868 658 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 ACP1P24666 158 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 RXRGP48443 463 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 ARRB1P49407 418 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 UCNP55089 124 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 SRSF1Q07955 248 aaKnown RBP eCLIP13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 BROXQ5VW32 411 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 KDM7AQ6ZMT4 941 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 NELFCDQ8IXH7 590 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 GOLGA1Q92805 767 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 ZNF578Q96N58 590 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 RSPH9Q9H1X1 276 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 FBXL12Q9NXK8 326 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 MARCH2Q9P0N8 246 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 ADAMTS1Q9UHI8 967 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 NCKAP1Q9Y2A7 1128 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 PCDHB1Q9Y5F3 818 aa13.38□□□□□ -0.27
RABGGTA-213ENST00000560127 SLC12A8A0AV02 714 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 LRRIQ3A6PVS8 624 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 MT-CO3P00414 261 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 DLDP09622 509 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 KRT10P13645 584 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 ASPAP45381 313 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 NXPH1P58417 271 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 CLDN10P78369 228 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms