RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CCKARP32238 428 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 IDUAP35475 653 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 IL6STP40189 918 aaPredicted RBP5.83□□□□□ -1.48
PRPF39-209ENST00000556353 STT3AP46977 705 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 SEMA3BQ13214 749 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.83□□□□□ -1.48
PRPF39-209ENST00000556353 C9orf47Q6ZRZ4 202 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 KIAA0408Q6ZU52 694 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 RNF152Q8N8N0 203 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 GRAMD1AQ96CP6 724 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 SNX27Q96L92 541 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 EIF3CQ99613 913 aaKnown RBP5.83□□□□□ -1.48
PRPF39-209ENST00000556353 TUBB6Q9BUF5 446 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 METTL14Q9HCE5 456 aaKnown RBP5.83□□□□□ -1.48
PRPF39-209ENST00000556353 MADDQ8WXG6 1647 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 ARHGEF40Q8TER5 1519 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 CD109Q6YHK3 1445 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 IGLV5-39A0A0G2JS06 123 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 A0A1W2PPC4 97 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 APOL1O14791 398 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 CCKBRP32239 447 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 GSTM5P46439 218 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 GAB1Q13480 694 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 ATP1A4Q13733 1029 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 MANEAQ5SRI9 462 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 CCDC144NLQ6NUI1 221 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 ADGRF4Q8IZF3 695 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 OR52L2PQ8NGH6 319 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 PMM1Q92871 262 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 NLRP4Q96MN2 994 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 GATA5Q9BWX5 397 aaPredicted RBP5.82□□□□□ -1.48
PRPF39-209ENST00000556353 PCDHAC1Q9H158 963 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 PAPOLBQ9NRJ5 636 aaKnown RBP5.82□□□□□ -1.48
PRPF39-209ENST00000556353 GJB4Q9NTQ9 266 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 ZBTB40Q9NUA8 1239 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 ZMYND8Q9ULU4 1186 aaPredicted RBP5.82□□□□□ -1.48
PRPF39-209ENST00000556353 EFCAB5A4FU69 1503 aa5.82□□□□□ -1.48
PRPF39-209ENST00000556353 CDK13Q14004 1512 aaKnown RBP5.82□□□□□ -1.48
PRPF39-209ENST00000556353 KIF14Q15058 1648 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.81□□□□□ -1.48
PRPF39-209ENST00000556353 VIPP01282 170 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 ALPLP05186 524 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 PRIM2P49643 509 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 IFIT5Q13325 482 aaKnown RBP5.81□□□□□ -1.48
PRPF39-209ENST00000556353 ELF2Q15723 593 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 SLC5A9Q2M3M2 681 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 GLE1Q53GS7 698 aaKnown RBP5.81□□□□□ -1.48
PRPF39-209ENST00000556353 DAB2IPQ5VWQ8 1189 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 RUSC1-AS1Q66K80 236 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 RAP1GAP2Q684P5 730 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 CRELD2Q6UXH1 353 aaPredicted RBP5.81□□□□□ -1.48
PRPF39-209ENST00000556353 KYAT3Q6YP21 454 aaKnown RBP5.81□□□□□ -1.48
PRPF39-209ENST00000556353 RFX6Q8HWS3 928 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 KAT2BQ92831 832 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 ZNF845Q96IR2 970 aaPredicted RBP5.81□□□□□ -1.48
PRPF39-209ENST00000556353 MARK4Q96L34 752 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 TTLL2Q9BWV7 592 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 TRIM2Q9C040 744 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 MOV10Q9HCE1 1003 aaKnown RBP5.81□□□□□ -1.48
PRPF39-209ENST00000556353 ZNF580Q9UK33 172 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 FAM50BQ9Y247 325 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 MYO5CQ9NQX4 1742 aa5.81□□□□□ -1.48
PRPF39-209ENST00000556353 RIMS1Q86UR5 1692 aaKnown RBP5.81□□□□□ -1.48
PRPF39-209ENST00000556353 SPATA31A5Q5VU36 1347 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 SPATA31A7Q8IWB4 1347 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 CCDC187A0A096LP49 1063 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 SLC8A1P32418 973 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 SOX2P48431 317 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 ALDH7A1P49419 539 aaKnown RBP5.8□□□□□ -1.48
PRPF39-209ENST00000556353 ZNF84P51523 738 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 P3H1Q32P28 736 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 ACSM6Q6P461 480 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 LVRNQ6Q4G3 990 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 SLC44A5Q8NCS7 719 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 GJA10Q969M2 543 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 NUDT22Q9BRQ3 303 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 EIF2AQ9BY44 585 aaKnown RBP5.8□□□□□ -1.48
PRPF39-209ENST00000556353 CDCP1Q9H5V8 836 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 TMEM8AQ9HCN3 771 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 DECR2Q9NUI1 292 aa5.8□□□□□ -1.48
PRPF39-209ENST00000556353 IPO11Q9UI26 975 aaKnown RBP5.8□□□□□ -1.48
PRPF39-209ENST00000556353 CDC42BPBQ9Y5S2 1711 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 ZMYM4Q5VZL5 1548 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 EMSYQ7Z589 1322 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 OR2W5A6NFC9 320 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 FAM90A8PA6NJQ4 464 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 TLX3O43711 291 aaPredicted RBP5.79□□□□□ -1.48
PRPF39-209ENST00000556353 UGDHO60701 494 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 SYF2O95926 243 aaKnown RBP5.79□□□□□ -1.48
PRPF39-209ENST00000556353 ENO1P06733 434 aaKnown RBP5.79□□□□□ -1.48
PRPF39-209ENST00000556353 FAM90A13PP0C7W8 464 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 FAM90A24PP0C7X0 464 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 CBSLP0DN79 551 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 ALADP13716 330 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 SLC5A1P13866 664 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 EGR1P18146 543 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 TNFRSF1BP20333 461 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 GABRB3P28472 473 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 CBSP35520 551 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 THBS3P49746 956 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms