RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 HIC2Q96JB3 615 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 QTRT1Q9BXR0 403 aaKnown RBP6.6□□□□□ -1.35
PCF11-202ENST00000528336 PDGFCQ9NRA1 345 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 RXFP3Q9NSD7 469 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 DACT1Q9NYF0 836 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 WDR97A6NE52 1622 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 TDRD9Q8NDG6 1382 aaKnown RBP6.59□□□□□ -1.35
PCF11-202ENST00000528336 KIF28PB7ZC32 967 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 M0QYT0 321 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 OVOL3O00110 214 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 SYT5O00445 386 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 ACKR2O00590 384 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 ITGA2BP08514 1039 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 PEPDP12955 493 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 THBS4P35443 961 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 AGTR2P50052 363 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 C21orf58P58505 322 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 MRPS21P82921 87 aaKnown RBP6.59□□□□□ -1.35
PCF11-202ENST00000528336 GAB1Q13480 694 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 CBFBQ13951 182 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 GRAMD1BQ3KR37 738 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 MIS18BP1Q6P0N0 1132 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 KYAT3Q6YP21 454 aaKnown RBP6.59□□□□□ -1.35
PCF11-202ENST00000528336 RINLQ6ZS11 566 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 AKAP1Q92667 903 aaKnown RBP eCLIP6.59□□□□□ -1.35
PCF11-202ENST00000528336 ELOVL1Q9BW60 279 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 KATNAL1Q9BW62 490 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 NUAK2Q9H093 628 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 CCDC134Q9H6E4 229 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 PTPRHQ9HD43 1115 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 ARL8BQ9NVJ2 186 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 FRMD4BQ9Y2L6 1034 aa6.59□□□□□ -1.35
PCF11-202ENST00000528336 AQRO60306 1485 aaKnown RBP eCLIP6.59□□□□□ -1.361e-7■■■■■ 31.6
PCF11-202ENST00000528336 WDR17Q8IZU2 1322 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 EIF4G3O43432 1585 aaKnown RBP6.58□□□□□ -1.36
PCF11-202ENST00000528336 TTC34A8MYJ7 566 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 PPP6CO00743 305 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 PPP6R2O75170 966 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 RNF8O76064 485 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 LATS1O95835 1130 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 LDHCP07864 332 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 MATN1P21941 496 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 FOXF2Q12947 444 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 ZNF268Q14587 947 aaPredicted RBP6.58□□□□□ -1.36
PCF11-202ENST00000528336 SEC23BQ15437 767 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 ZNF569Q5MCW4 686 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 ATPAF1Q5TC12 328 aaPredicted RBP6.58□□□□□ -1.36
PCF11-202ENST00000528336 SULT6B1Q6IMI4 303 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 KLHL17Q6TDP4 642 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 TRABD2AQ86V40 505 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 CCDC117Q8IWD4 279 aaPredicted RBP6.58□□□□□ -1.36
PCF11-202ENST00000528336 C1orf131Q8NDD1 294 aaKnown RBP6.58□□□□□ -1.36
PCF11-202ENST00000528336 NPIPB3Q92617 1050 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 BRD8Q9H0E9 1235 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 ZHX3Q9H4I2 956 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 CDCP1Q9H5V8 836 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 ASNSD1Q9NWL6 643 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 GRHPRQ9UBQ7 328 aa6.58□□□□□ -1.36
PCF11-202ENST00000528336 UBE2J1Q9Y385 318 aaPredicted RBP6.58□□□□□ -1.36
PCF11-202ENST00000528336 SPATA31A1Q5TZJ5 1347 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 C16orf96A6NNT2 1141 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 ACTL6BO94805 426 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 TUBB4AP04350 444 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 CERS1P27544 350 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 ARHGAP25P42331 645 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 PDCD2Q16342 344 aaPredicted RBP6.57□□□□□ -1.36
PCF11-202ENST00000528336 ERAP2Q6P179 960 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 ZNF813Q6ZN06 617 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 YTHDF3Q7Z739 585 aaKnown RBP6.57□□□□□ -1.36
PCF11-202ENST00000528336 ZNF575Q86XF7 245 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 CNGA4Q8IV77 575 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 CACNA2D3Q8IZS8 1091 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 MYCT1Q8N699 235 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 PAF1Q8N7H5 531 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 TEX19Q8NA77 164 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 MYRIPQ8NFW9 859 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 OSR1Q8TAX0 266 aaPredicted RBP6.57□□□□□ -1.36
PCF11-202ENST00000528336 EID2BQ96D98 161 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 LTV1Q96GA3 475 aaPredicted RBP6.57□□□□□ -1.36
PCF11-202ENST00000528336 REXO5Q96IC2 774 aaKnown RBP6.57□□□□□ -1.36
PCF11-202ENST00000528336 PAAF1Q9BRP4 392 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 RTKNQ9BST9 563 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 MECRQ9BV79 373 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 MLXIPQ9HAP2 919 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 FLRT1Q9NZU1 646 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 SEMA5BQ9P283 1151 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 KLHL13Q9P2N7 655 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 HERC5Q9UII4 1024 aaKnown RBP6.57□□□□□ -1.36
PCF11-202ENST00000528336 RAB21Q9UL25 225 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 MAFFQ9ULX9 164 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 GAPVD1Q14C86 1478 aa6.57□□□□□ -1.36
PCF11-202ENST00000528336 GRIN2BQ13224 1484 aa6.56□□□□□ -1.36
PCF11-202ENST00000528336 GXYLT2A0PJZ3 443 aa6.56□□□□□ -1.36
PCF11-202ENST00000528336 PRYO14603 147 aa6.56□□□□□ -1.36
PCF11-202ENST00000528336 NPHP1O15259 732 aa6.56□□□□□ -1.36
PCF11-202ENST00000528336 ANP32CO43423 234 aa6.56□□□□□ -1.36
PCF11-202ENST00000528336 CELA2AP08217 269 aa6.56□□□□□ -1.36
PCF11-202ENST00000528336 NDUFS1P28331 727 aa6.56□□□□□ -1.36
PCF11-202ENST00000528336 EPHB2P29323 1055 aa6.56□□□□□ -1.36
PCF11-202ENST00000528336 SLC8A1P32418 973 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms