RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PRSS57Q6UWY2 283 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 CWC27Q6UX04 472 aaKnown RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 ANKS3Q6ZW76 656 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 CXorf67Q86X51 503 aaPredicted RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 TMPRSS6Q8IU80 811 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 SMG8Q8ND04 991 aaKnown RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 MAPK1IP1LQ8NDC0 245 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 GRHL3Q8TE85 626 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 PTPRN2Q92932 1015 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 TMEM159Q96B96 161 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 C1orf159Q96HA4 380 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 FAM227BQ96M60 508 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 TTC14Q96N46 770 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 GFM1Q96RP9 751 aaKnown RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 MAP7D2Q96T17 732 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 CGRRF1Q99675 332 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 CMKLR1Q99788 373 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 MTA3Q9BTC8 594 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 TRIM9Q9C026 710 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 NAPBQ9H115 298 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 CAAP1Q9H8G2 361 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 CNNM2Q9H8M5 875 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 EPB41L4AQ9HCS5 686 aaPredicted RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 NPDC1Q9NQX5 325 aaPredicted RBP3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 ACSS2Q9NR19 701 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 RASSF1Q9NS23 344 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 STX8Q9UNK0 236 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 PCDHGA10Q9Y5H3 936 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 UNC13CQ8NB66 2214 aa3.41□□□□□ -1.86
SCARNA13-201ENST00000516672 A0A0D9SFI3 127 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 CASTOR2A6NHX0 329 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 FOXP2O15409 715 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 CDC45O75419 566 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 JRKO75564 520 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 NEBLO76041 1014 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 CNOT4O95628 575 aaKnown RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 HMGB1P09429 215 aaKnown RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 CCL4P13236 92 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 ITGA2P17301 1181 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 CD53P19397 219 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 SFPQP23246 707 aaKnown RBP eCLIP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 IGFBP6P24592 240 aaPredicted RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 MAP4P27816 1152 aaKnown RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 HOXA13P31271 388 aaPredicted RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 MCM4P33991 863 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 NOS2P35228 1153 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 SLC26A2P50443 739 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 TFAP4Q01664 338 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 GAD2Q05329 585 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 PPARAQ07869 468 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 DMPKQ09013 629 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 PLD1Q13393 1074 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF268Q14587 947 aaPredicted RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 IHHQ14623 411 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 OCLNQ16625 522 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 IMMTQ16891 758 aaKnown RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 ARHGAP44Q17R89 818 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 FOXD4L6Q3SYB3 417 aaPredicted RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 SLC45A4Q5BKX6 768 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 RNF20Q5VTR2 975 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 EFCAB12Q6NXP0 572 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 ZCCHC8Q6NZY4 707 aaKnown RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 SHISA2Q6UWI4 295 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 FOXD4L3Q6VB84 417 aaPredicted RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 MFSD6Q6ZSS7 791 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 DNAJB7Q7Z6W7 309 aaPredicted RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 SGMS1Q86VZ5 419 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 DGKHQ86XP1 1220 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 NLGN4XQ8N0W4 816 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 TMTC2Q8N394 836 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 LRRC71Q8N4P6 559 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 KYQ8NBH2 561 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 NLGN4YQ8NFZ3 816 aaPredicted RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 FAR1Q8WVX9 515 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 ESR2Q92731 530 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 VOPP1Q96AW1 172 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 COL21A1Q96P44 957 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 TRAPPC9Q96Q05 1148 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 GCNAQ96QF7 691 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 SEC62Q99442 399 aaKnown RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 ESYT1Q9BSJ8 1104 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 DUSP23Q9BVJ7 150 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 NUDT9Q9BW91 350 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 GCOM2Q9BZD3 368 aaPredicted RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 KRT23Q9C075 422 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 ZMYND15Q9H091 742 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 MAP3K20Q9NYL2 800 aaKnown RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 AFF4Q9UHB7 1163 aaKnown RBP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 ZMYM5Q9UJ78 669 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 MAFFQ9ULX9 164 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 PCDHB5Q9Y5E4 795 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 PCDHGB1Q9Y5G3 927 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 RNF213Q63HN8 5207 aa3.4□□□□□ -1.87
SCARNA13-201ENST00000516672 NCOA6Q14686 2063 aaPredicted RBP3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 MYOFQ9NZM1 2061 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 FAM237BA0A1B0GVD1 139 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 DDX11L8A8MPP1 907 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 MINDY4BA8MYZ0 360 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms