RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 HPS3Q969F9 1004 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 MYLPFQ96A32 169 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 SYAP1Q96A49 352 aaPredicted RBP7.91□□□□□ -1.14
CCSER1-208ENST00000509109 CCDC127Q96BQ5 260 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 SPATA17Q96L03 361 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 PKMYT1Q99640 499 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 ELOVL4Q9GZR5 314 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 SNX25Q9H3E2 840 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 TRPC7Q9HCX4 862 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 TMLHEQ9NVH6 421 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 MAGEC2Q9UBF1 373 aaPredicted RBP7.91□□□□□ -1.14
CCSER1-208ENST00000509109 VTI1BQ9UEU0 232 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 USP18Q9UMW8 372 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 ATP8B3O60423 1300 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 PTPRJQ12913 1337 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 ANAPC1Q9H1A4 1944 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 SPAG17Q6Q759 2223 aa7.91□□□□□ -1.14
CCSER1-208ENST00000509109 EXOC3O60645 756 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 TACC1O75410 805 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 KIF20AO95235 890 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 NFATC1O95644 943 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 CBX7O95931 251 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 CST3P01034 146 aaPredicted RBP7.9□□□□□ -1.14
CCSER1-208ENST00000509109 FAM163BP0C2L3 166 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 P4HA1P13674 534 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 DRD1P21728 446 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 ATICP31939 592 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 ST13P50502 369 aaKnown RBP7.9□□□□□ -1.14
CCSER1-208ENST00000509109 CDR1P51861 262 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 PSMC1P62191 440 aaKnown RBP7.9□□□□□ -1.14
CCSER1-208ENST00000509109 SATB1Q01826 763 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 TNK2Q07912 1038 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 CYP24A1Q07973 514 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 SIM2Q14190 667 aaPredicted RBP7.9□□□□□ -1.14
CCSER1-208ENST00000509109 KNOP1Q1ED39 458 aaKnown RBP7.9□□□□□ -1.14
CCSER1-208ENST00000509109 TSNAXIP1Q2TAA8 658 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 FBXO43Q4G163 708 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 RESP18Q5W5W9 173 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 LMBRD2Q68DH5 695 aaPredicted RBP7.9□□□□□ -1.14
CCSER1-208ENST00000509109 TXNDC8Q6A555 127 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 FAM171BQ6P995 826 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 PRR23BQ6ZRT6 265 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 Q6ZS52 159 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 TMEM150AQ86TG1 271 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 CDH24Q86UP0 819 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 KIAA1958Q8N8K9 716 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 PHC3Q8NDX5 983 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 ZSWIM2Q8NEG5 633 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 OR5B17Q8NGF7 314 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 TTC8Q8TAM2 541 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 MYCBPAPQ8TBZ2 947 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 SCFD1Q8WVM8 642 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 KBTBD7Q8WVZ9 684 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 CCDC47Q96A33 483 aaKnown RBP7.9□□□□□ -1.14
CCSER1-208ENST00000509109 RMDN1Q96DB5 314 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 CCDC34Q96HJ3 373 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 HSPA12BQ96MM6 686 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 LRRC3BQ96PB8 259 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 SLITRK1Q96PX8 696 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 DNAI2Q9GZS0 605 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 EBF3Q9H4W6 596 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 GKN1Q9NS71 199 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 EXOC1Q9NV70 894 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 DUS2Q9NX74 493 aaKnown RBP7.9□□□□□ -1.14
CCSER1-208ENST00000509109 TRPM5Q9NZQ8 1165 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 TJP2Q9UDY2 1190 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 USP25Q9UHP3 1055 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 ARHGAP26Q9UNA1 814 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 CCL26Q9Y258 94 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 ATP6V1DQ9Y5K8 247 aa7.9□□□□□ -1.14
CCSER1-208ENST00000509109 RALGAPA1Q6GYQ0 2036 aa7.9□□□□□ -1.15
CCSER1-208ENST00000509109 KIAA1549LQ6ZVL6 1849 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 CCDC163A0A0D9SF12 145 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 TRDMT1O14717 391 aaKnown RBP7.89□□□□□ -1.15
CCSER1-208ENST00000509109 SLC9A3R1O14745 358 aaPredicted RBP7.89□□□□□ -1.15
CCSER1-208ENST00000509109 TGFB1I1O43294 461 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 TADA3O75528 432 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 RETP07949 1114 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 TCF3P15923 654 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 HDCP19113 662 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 HOXD13P35453 343 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 GNL1P36915 607 aaPredicted RBP7.89□□□□□ -1.15
CCSER1-208ENST00000509109 GPR15P49685 360 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 NOP14P78316 857 aaKnown RBP7.89□□□□□ -1.15
CCSER1-208ENST00000509109 RPL6Q02878 288 aaKnown RBP7.89□□□□□ -1.15
CCSER1-208ENST00000509109 BIRC3Q13489 604 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 ZNF77Q15935 545 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 ZNF699Q32M78 642 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 WDR72Q3MJ13 1102 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 TMEM196Q5HYL7 178 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 MDH1BQ5I0G3 518 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 SDHAF4Q5VUM1 108 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 OGFOD2Q6N063 350 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 BNC2Q6ZN30 1099 aaPredicted RBP7.89□□□□□ -1.15
CCSER1-208ENST00000509109 CEP68Q76N32 757 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 LIMS2Q7Z4I7 341 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 OSTM1Q86WC4 334 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 DDX42Q86XP3 938 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCSER1-208ENST00000509109 NELFCDQ8IXH7 590 aa7.89□□□□□ -1.15
CCSER1-208ENST00000509109 MFSD4AQ8N468 514 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms