RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 RNF214Q8ND24 703 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 OR13H1Q8NG92 308 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 RCC1LQ96I51 464 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 USP28Q96RU2 1077 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 KCNK16Q96T55 309 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 TUBB2BQ9BVA1 445 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 SPZ1Q9BXG8 430 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 CACNG6Q9BXT2 260 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 ADNPQ9H2P0 1102 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 PNNQ9H307 717 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 FKBP14Q9NWM8 211 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 TUBA8Q9NY65 449 aaPredicted RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 LMCD1Q9NZU5 365 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 AFF4Q9UHB7 1163 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 DNAJC16Q9Y2G8 782 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 NUP153P49790 1475 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 ABCC5O15440 1437 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 NUP160Q12769 1436 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 CHD1O14646 1710 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 TTC34A8MYJ7 566 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 ADH1BP00325 375 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 SCG5P05408 212 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 HSPA8P11142 646 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 KRT4P19013 534 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 NR2F2P24468 414 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 PTX3P26022 381 aaPredicted RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 LTKP29376 864 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 NUP62P37198 522 aaPredicted RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 CYP27A1Q02318 531 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 NCF4Q15080 339 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 RBBP5Q15291 538 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 CRY1Q16526 586 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 INSCQ1MX18 579 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 Q3ZCU0 254 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 RHOUQ7L0Q8 258 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 ARHGEF39Q8N4T4 335 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 SLC22A8Q8TCC7 542 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 ST7LQ8TDW4 575 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 HEMGNQ9BXL5 484 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 RHBGQ9H310 441 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 KCNF1Q9H3M0 494 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 KCNK13Q9HB14 408 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 SPACA1Q9HBV2 294 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 RXFP1Q9HBX9 757 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 NOD2Q9HC29 1040 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 PALMDQ9NP74 551 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 SPASTQ9UBP0 616 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 CROTQ9UKG9 612 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 KCNK7Q9Y2U2 307 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 ANKRD30BQ9BXX2 1392 aa7.77□□□□□ -1.16
PDGFRA-206ENST00000508170 ZNF879B4DU55 563 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 TRDMT1O14717 391 aaKnown RBP7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 AXIN1O15169 862 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 ZNF862O60290 1169 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 B4GALT4O60513 344 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 GCATO75600 419 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 SEC31AO94979 1220 aaKnown RBP7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 PDE8BO95263 885 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 GLI1P08151 1106 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 STAG3L3P0CL85 134 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 FSHRP23945 695 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 PGM1P36871 562 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 ETV3P41162 512 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 SLC5A3P53794 718 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 POLE2P56282 527 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 OTUD4Q01804 1114 aaKnown RBP7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 PTSQ03393 145 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 TRAP1Q12931 704 aaKnown RBP7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 IL10RAQ13651 578 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 CBFBQ13951 182 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 STK38Q15208 465 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 PTPAQ15257 358 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 ANKS1BQ7Z6G8 1248 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 TCAIMQ8N3R3 496 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 OR6Y1Q8NGX8 325 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 OR8K5Q8NH50 307 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 KAT2BQ92831 832 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 C7orf34Q96L11 122 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 SNX22Q96L94 193 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 COQ7Q99807 217 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 CARD6Q9BX69 1037 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 GPR61Q9BZJ8 451 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 IL21RQ9HBE5 538 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 RPRD2Q5VT52 1461 aaKnown RBP7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 CEP170Q5SW79 1584 aa7.77□□□□□ -1.17
PDGFRA-206ENST00000508170 MFSD2BA6NFX1 497 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 LMNAP02545 664 aaKnown RBP7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ANXA2P07355 339 aaKnown RBP7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 PRKAR1AP10644 381 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 HOXD8P13378 290 aaPredicted RBP7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 YY1P25490 414 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 PRKAR2BP31323 418 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 CHRNA3P32297 505 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 LMAN1P49257 510 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 NPEPPSP55786 919 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 BCAR1P56945 870 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 SH3BP2P78314 561 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 TDGQ13569 410 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 AANATQ16613 207 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ARHGAP17Q68EM7 881 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms